RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TTC28Q96AY4 2481 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-204ENST00000589118 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 CHGBP05060 677 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 RARBP10826 455 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 RLBP1P12271 317 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 PDE6AP16499 860 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 PBX2P40425 430 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 FAAP100Q0VG06 881 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 MMP19Q99542 508 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 ARMT1Q9H993 441 aa18.3■□□□□ 0.52
SF3A2-204ENST00000589118 DCP1AQ9NPI6 582 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-204ENST00000589118 KIAA0355O15063 1070 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 ZNF865P0CJ78 1059 aaPredicted RBP18.29■□□□□ 0.52
SF3A2-204ENST00000589118 DNAJB2P25686 324 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 FPGSQ05932 587 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 ZKSCAN2Q63HK3 967 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.52
SF3A2-204ENST00000589118 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 CRNKL1Q9BZJ0 848 aaKnown RBP18.29■□□□□ 0.52
SF3A2-204ENST00000589118 SLC5A4Q9NY91 659 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 TMX2Q9Y320 296 aa18.29■□□□□ 0.52
SF3A2-204ENST00000589118 MYADML2A6NDP7 307 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 APBB1O00213 710 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 COL9A1P20849 921 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 ZNF792Q3KQV3 632 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 TMEM179Q6ZVK1 233 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 C16orf59Q7L2K0 433 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 MB21D1Q8N884 522 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 ZNF576Q9H609 170 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 VCPKMTQ9H867 229 aa18.28■□□□□ 0.52
SF3A2-204ENST00000589118 TCRBV5S4A2TA0A5A2 114 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 GOLIM4O00461 696 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 RAD21O60216 631 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 IGSF3O75054 1194 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 ICA1Q05084 483 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 RNF180Q86T96 592 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 ITPRIPQ8IWB1 547 aa18.27■□□□□ 0.52
SF3A2-204ENST00000589118 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
SF3A2-204ENST00000589118 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.26■□□□□ 0.51
SF3A2-204ENST00000589118 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.26■□□□□ 0.51
SF3A2-204ENST00000589118 EEF2P13639 858 aaKnown RBP18.26■□□□□ 0.51
SF3A2-204ENST00000589118 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
SF3A2-204ENST00000589118 ACLYP53396 1101 aa18.26■□□□□ 0.51
SF3A2-204ENST00000589118 SYMPKQ92797 1274 aaKnown RBP18.26■□□□□ 0.51
SF3A2-204ENST00000589118 ARHGEF10LQ9HCE6 1279 aa18.26■□□□□ 0.51
SF3A2-204ENST00000589118 MCM3APO60318 1980 aa18.26■□□□□ 0.51
SF3A2-204ENST00000589118 GBF1Q92538 1859 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 ACRP10323 421 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 STAT3P40763 770 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 CDK8P49336 464 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 KCTD2Q14681 263 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 CCDC85BQ15834 202 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-204ENST00000589118 KCNA10Q16322 511 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 TJAP1Q5JTD0 557 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 TIFAQ96CG3 184 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
SF3A2-204ENST00000589118 PRDM12Q9H4Q4 367 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 STARD7Q9NQZ5 370 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 ADAMTS5Q9UNA0 930 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
SF3A2-204ENST00000589118 SYNRGQ9UMZ2 1314 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 TNFRSF10AO00220 468 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 ADCY6O43306 1168 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 SLC25A27O95847 323 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 SNAI1O95863 264 aaPredicted RBP18.24■□□□□ 0.51
SF3A2-204ENST00000589118 FAM83BQ5T0W9 1011 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 RIPK3Q9Y572 518 aa18.24■□□□□ 0.51
SF3A2-204ENST00000589118 DCDC2CA8MYV0 355 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 VWA5AO00534 786 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 WDR46O15213 610 aaKnown RBP18.23■□□□□ 0.51
SF3A2-204ENST00000589118 MBD4O95243 580 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 TIMP1P01033 207 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 AKR1A1P14550 325 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 CSF2RAP15509 400 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 ANKRD33Q7Z3H0 272 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 PBX4Q9BYU1 374 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 SWAP70Q9UH65 585 aa18.23■□□□□ 0.51
SF3A2-204ENST00000589118 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-204ENST00000589118 TMEM265A0A087WTH1 108 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 USP17L21D6R901 530 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 CCSAPQ6IQ19 270 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-204ENST00000589118 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 PPP1R12CQ9BZL4 782 aa18.22■□□□□ 0.51
SF3A2-204ENST00000589118 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-204ENST00000589118 TBX21Q9UL17 535 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms