RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 USP17L22D6RA61 530 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 USP17L17D6RBQ6 530 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 USP17L19D6RCP7 530 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 USP17L20D6RJB6 530 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 WDR46O15213 610 aaKnown RBP23.21■■□□□ 1.31
SAFB-206ENST00000589006 NDUFB10O96000 172 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 MCCP23508 829 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 MCM5P33992 734 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 USP17L24Q0WX57 530 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 TAF1CQ15572 869 aaPredicted RBP23.21■■□□□ 1.31
SAFB-206ENST00000589006 CATSPERGQ6ZRH7 1159 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 SPICE1Q8N0Z3 855 aa23.21■■□□□ 1.31
SAFB-206ENST00000589006 RPAP3Q9H6T3 665 aaPredicted RBP23.21■■□□□ 1.31
SAFB-206ENST00000589006 ADGRA2Q96PE1 1338 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 OSBPP22059 807 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 CHST3Q7LGC8 479 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 IGDCC4Q8TDY8 1250 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 PARK7Q99497 189 aaKnown RBP23.2■■□□□ 1.3
SAFB-206ENST00000589006 ASCC2Q9H1I8 757 aaPredicted RBP23.2■■□□□ 1.3
SAFB-206ENST00000589006 ZFYVE28Q9HCC9 887 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 PNMA3Q9UL41 463 aa23.2■■□□□ 1.3
SAFB-206ENST00000589006 WDR19Q8NEZ3 1342 aa23.19■■□□□ 1.3
SAFB-206ENST00000589006 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
SAFB-206ENST00000589006 CYP2C8P10632 490 aa23.19■■□□□ 1.3
SAFB-206ENST00000589006 EXOSC10Q01780 885 aaKnown RBP23.19■■□□□ 1.3
SAFB-206ENST00000589006 SLFN13Q68D06 897 aa23.19■■□□□ 1.3
SAFB-206ENST00000589006 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
SAFB-206ENST00000589006 PRC1O43663 620 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 TLR2O60603 784 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 SART3Q15020 963 aaKnown RBP23.18■■□□□ 1.3
SAFB-206ENST00000589006 DHX32Q7L7V1 743 aaKnown RBP23.18■■□□□ 1.3
SAFB-206ENST00000589006 IL17RAQ96F46 866 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 GMCL1Q96IK5 515 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 ZNF333Q96JL9 665 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 TMEM87BQ96K49 555 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 TMEM106CQ9BVX2 250 aa23.18■■□□□ 1.3
SAFB-206ENST00000589006 IRX3P78415 501 aaPredicted RBP23.17■■□□□ 1.3
SAFB-206ENST00000589006 SP3Q02447 781 aa23.17■■□□□ 1.3
SAFB-206ENST00000589006 IFIT1BQ5T764 474 aaKnown RBP23.17■■□□□ 1.3
SAFB-206ENST00000589006 JAKMIP1Q96N16 626 aaKnown RBP23.17■■□□□ 1.3
SAFB-206ENST00000589006 P2RX7Q99572 595 aaKnown RBP23.17■■□□□ 1.3
SAFB-206ENST00000589006 ERICH2A1L162 156 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 RAD21O60216 631 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 PSMA5P28066 241 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 ANAPC15P60006 121 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 FAM83BQ5T0W9 1011 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 PNMA1Q8ND90 353 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
SAFB-206ENST00000589006 TM6SF1Q9BZW5 370 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 KAT14Q9H8E8 782 aa23.16■■□□□ 1.3
SAFB-206ENST00000589006 RANBP2P49792 3224 aaKnown RBP23.16■■□□□ 1.3
SAFB-206ENST00000589006 H0YGN5 161 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 SNHG28P0DPA3 235 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 BMP3P12645 472 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 COG2Q14746 738 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 WTAPQ15007 396 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 C17orf99Q6UX52 265 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 LBX2Q6XYB7 198 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 DCAF4Q8WV16 495 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 TANGO6Q9C0B7 1094 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 LY9Q9HBG7 655 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 SENP2Q9HC62 589 aa23.15■■□□□ 1.3
SAFB-206ENST00000589006 MYPNQ86TC9 1320 aa23.14■■□□□ 1.3
SAFB-206ENST00000589006 SH2B2O14492 632 aaPredicted RBP23.14■■□□□ 1.29
SAFB-206ENST00000589006 PDHBP11177 359 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 LIFRP42702 1097 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 SLC1A4P43007 532 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 GCLCP48506 637 aaPredicted RBP23.14■■□□□ 1.29
SAFB-206ENST00000589006 HERVK_113P62684 666 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 PTCH2Q9Y6C5 1203 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 ZSWIM8A7E2V4 1837 aa23.14■■□□□ 1.29
SAFB-206ENST00000589006 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 MYCP01106 439 aaPredicted RBP23.13■■□□□ 1.29
SAFB-206ENST00000589006 BCRP11274 1271 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 DSG3P32926 999 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 SLC9C1Q4G0N8 1177 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 BLOC1S2Q6QNY1 142 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 POTEEQ6S8J3 1075 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 TMTC2Q8N394 836 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 SMCR8Q8TEV9 937 aaPredicted RBP23.13■■□□□ 1.29
SAFB-206ENST00000589006 GTF3C2Q8WUA4 911 aaPredicted RBP23.13■■□□□ 1.29
SAFB-206ENST00000589006 GPHNQ9NQX3 736 aaPredicted RBP23.13■■□□□ 1.29
SAFB-206ENST00000589006 ADAMTS5Q9UNA0 930 aa23.13■■□□□ 1.29
SAFB-206ENST00000589006 SPDYE16A6NNV3 312 aaPredicted RBP23.12■■□□□ 1.29
SAFB-206ENST00000589006 PLA2G6O60733 806 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 FLOT1O75955 427 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 CPA1P15085 419 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
SAFB-206ENST00000589006 RPS6KB1P23443 525 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 RASGRP2Q7LDG7 609 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 FBXL16Q8N461 479 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 LRRC2Q9BYS8 371 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 BACH2Q9BYV9 841 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 FBXO28Q9NVF7 368 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 CPA4Q9UI42 421 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 FEM1BQ9UK73 627 aa23.12■■□□□ 1.29
SAFB-206ENST00000589006 COL11A1P12107 1806 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms