RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 DCAF4Q8WV16 495 aa23.4■■□□□ 1.34
DNMT1-216ENST00000588952 RPAP3Q9H6T3 665 aaPredicted RBP23.4■■□□□ 1.34
DNMT1-216ENST00000588952 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
DNMT1-216ENST00000588952 WDR33Q9C0J8 1336 aaKnown RBP23.39■■□□□ 1.34
DNMT1-216ENST00000588952 MANSC4A6NHS7 340 aaPredicted RBP23.39■■□□□ 1.33
DNMT1-216ENST00000588952 BTBD19C9JJ37 291 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 WDR46O15213 610 aaKnown RBP23.39■■□□□ 1.33
DNMT1-216ENST00000588952 ZBTB43O43298 467 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 ST18O60284 1047 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 GOLGA8HP0CJ92 632 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 SLC1A4P43007 532 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 KIF23Q02241 960 aaPredicted RBP23.39■■□□□ 1.33
DNMT1-216ENST00000588952 ZNF543Q08ER8 600 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 CCDC96Q2M329 555 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 TTBK2Q6IQ55 1244 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 FASTKD5Q7L8L6 764 aaKnown RBP23.39■■□□□ 1.33
DNMT1-216ENST00000588952 STAG2Q8N3U4 1231 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 MAD2L2Q9UI95 211 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 NID2Q14112 1375 aa23.39■■□□□ 1.33
DNMT1-216ENST00000588952 THSD7BQ9C0I4 1608 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 BMP3P12645 472 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 ME3Q16798 604 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 ZNF274Q96GC6 653 aaPredicted RBP23.38■■□□□ 1.33
DNMT1-216ENST00000588952 GPCPD1Q9NPB8 672 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 FAM217BQ9NTX9 383 aaPredicted RBP23.38■■□□□ 1.33
DNMT1-216ENST00000588952 FBXO28Q9NVF7 368 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 AGTPBP1Q9UPW5 1226 aa23.38■■□□□ 1.33
DNMT1-216ENST00000588952 PALM3A6NDB9 673 aaPredicted RBP23.37■■□□□ 1.33
DNMT1-216ENST00000588952 GOLGA8AA7E2F4 631 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 IGF2BP3O00425 579 aaKnown RBP eCLIP23.37■■□□□ 1.33
DNMT1-216ENST00000588952 ST3GAL1Q11201 340 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 STK3Q13188 491 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 NOGQ13253 232 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 SLC35G1Q2M3R5 365 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 MAP3K14Q99558 947 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 CPVLQ9H3G5 476 aa23.37■■□□□ 1.33
DNMT1-216ENST00000588952 RLFQ13129 1914 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 PARP1P09874 1014 aaKnown RBP23.36■■□□□ 1.33
DNMT1-216ENST00000588952 CDC27P30260 824 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 METAP2P50579 478 aaKnown RBP eCLIP23.36■■□□□ 1.33
DNMT1-216ENST00000588952 CCT2P78371 535 aaKnown RBP23.36■■□□□ 1.33
DNMT1-216ENST00000588952 FANCBQ8NB91 859 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 TANGO6Q9C0B7 1094 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 NCOA5Q9HCD5 579 aaKnown RBP23.36■■□□□ 1.33
DNMT1-216ENST00000588952 ISY1Q9ULR0 285 aaKnown RBP23.36■■□□□ 1.33
DNMT1-216ENST00000588952 LIMCH1Q9UPQ0 1083 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 PARP14Q460N5 1801 aa23.36■■□□□ 1.33
DNMT1-216ENST00000588952 TMEM232C9JQI7 657 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 PLEKHA8P1O95397 391 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 CALM1P0DP23 149 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 CALM2P0DP24 149 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 CALM3P0DP25 149 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 RCAN1P53805 252 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 RTN1Q16799 776 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 ASPRV1Q53RT3 343 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 CATSPERGQ6ZRH7 1159 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 ANKRD23Q86SG2 305 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 NBPF11Q86T75 865 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L15C9J2P7 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L13C9JLJ4 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L11C9JVI0 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L18D6R9N7 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L22D6RA61 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L17D6RBQ6 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L19D6RCP7 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L20D6RJB6 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 PFKFB2O60825 505 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 HOXA7P31268 230 aaPredicted RBP23.34■■□□□ 1.33
DNMT1-216ENST00000588952 SLC16A2P36021 539 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 USP17L24Q0WX57 530 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 SCRN1Q12765 414 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
DNMT1-216ENST00000588952 IL27Q8NEV9 243 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 CTCFLQ8NI51 663 aaPredicted RBP23.34■■□□□ 1.33
DNMT1-216ENST00000588952 UBA5Q9GZZ9 404 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 TSHZ2Q9NRE2 1034 aa23.34■■□□□ 1.33
DNMT1-216ENST00000588952 PDHXO00330 501 aa23.33■■□□□ 1.33
DNMT1-216ENST00000588952 ADD1P35611 737 aaKnown RBP23.33■■□□□ 1.33
DNMT1-216ENST00000588952 TM4SF4P48230 202 aa23.33■■□□□ 1.33
DNMT1-216ENST00000588952 GPATCH4Q5T3I0 446 aaKnown RBP23.33■■□□□ 1.33
DNMT1-216ENST00000588952 TMTC3Q6ZXV5 915 aa23.33■■□□□ 1.33
DNMT1-216ENST00000588952 IFNL1Q8IU54 200 aa23.33■■□□□ 1.33
DNMT1-216ENST00000588952 ASCC2Q9H1I8 757 aaPredicted RBP23.33■■□□□ 1.33
DNMT1-216ENST00000588952 KLRF2D3W0D1 207 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 DTNBO60941 627 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 FLOT1O75955 427 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 SREBF2Q12772 1141 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 POTEEQ6S8J3 1075 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 BTNL9Q6UXG8 535 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 SRBD1Q8N5C6 995 aaKnown RBP23.32■■□□□ 1.32
DNMT1-216ENST00000588952 SNX21Q969T3 373 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 SLKQ9H2G2 1235 aaPredicted RBP23.32■■□□□ 1.32
DNMT1-216ENST00000588952 FEM1BQ9UK73 627 aa23.32■■□□□ 1.32
DNMT1-216ENST00000588952 CYTH3O43739 400 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 PLA2G6O60733 806 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 CYP2C8P10632 490 aa23.31■■□□□ 1.32
DNMT1-216ENST00000588952 KIF5BP33176 963 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms