RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 SEPT2Q15019 361 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 LRRC47Q8N1G4 583 aaKnown RBP14.61□□□□□ -0.07
TMED1-204ENST00000588289 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 GMCL1Q96IK5 515 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 SPATA32Q96LK8 384 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 FEZ1Q99689 392 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 PICK1Q9NRD5 415 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 ZBTB21Q9ULJ3 1066 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 ELP1O95163 1332 aa14.61□□□□□ -0.07
TMED1-204ENST00000588289 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 DDNO94850 711 aaPredicted RBP14.6□□□□□ -0.07
TMED1-204ENST00000588289 PLEKHA8P1O95397 391 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 BMP15O95972 392 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 NLRP5P59047 1200 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 RESTQ13127 1097 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 SRBD1Q8N5C6 995 aaKnown RBP14.6□□□□□ -0.07
TMED1-204ENST00000588289 TMEM87AQ8NBN3 555 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 PNMA2Q9UL42 364 aa14.6□□□□□ -0.07
TMED1-204ENST00000588289 DDX49Q9Y6V7 483 aaKnown RBP14.6□□□□□ -0.07
TMED1-204ENST00000588289 FAM196BA6NMK8 535 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 FIBPO43427 364 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 PRPF40AO75400 957 aaKnown RBP14.59□□□□□ -0.07
TMED1-204ENST00000588289 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 EPS15P42566 896 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 USP14P54578 494 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 UBE2HP62256 183 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 GUCY1B3Q02153 619 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 KIF23Q02241 960 aaPredicted RBP14.59□□□□□ -0.07
TMED1-204ENST00000588289 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 SF3A1Q15459 793 aaKnown RBP14.59□□□□□ -0.07
TMED1-204ENST00000588289 RILPL1Q5EBL4 403 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 MCTP2Q6DN12 878 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 TEX2Q8IWB9 1127 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 KCNG4Q8TDN1 519 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 CHURC1Q8WUH1 139 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.59□□□□□ -0.07
TMED1-204ENST00000588289 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
TMED1-204ENST00000588289 PPP1R12BO60237 982 aaPredicted RBP14.58□□□□□ -0.08
TMED1-204ENST00000588289 TRAK2O60296 914 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 BMP3P12645 472 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 DNM1Q05193 864 aaKnown RBP14.58□□□□□ -0.08
TMED1-204ENST00000588289 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 FAM160B2Q86V87 743 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 NOSTRINQ8IVI9 506 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 DIS3L2Q8IYB7 885 aaKnown RBP14.58□□□□□ -0.08
TMED1-204ENST00000588289 LPAR1Q92633 364 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 WDR90Q96KV7 1748 aa14.58□□□□□ -0.08
TMED1-204ENST00000588289 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 USP17L5A8MUK1 530 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 F5H6K3 240 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 YEATS4O95619 227 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 U2AF2P26368 475 aaKnown RBP eCLIP14.57□□□□□ -0.08
TMED1-204ENST00000588289 EPHX2P34913 555 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 NAPAP54920 295 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 KLRC3Q07444 240 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 FUT2Q10981 343 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 STK38Q15208 465 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
TMED1-204ENST00000588289 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
TMED1-204ENST00000588289 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 CMTR1Q8N1G2 835 aaKnown RBP14.57□□□□□ -0.08
TMED1-204ENST00000588289 TRPM4Q8TD43 1214 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 PHF20Q9BVI0 1012 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 RIOX1Q9H6W3 641 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 TMX2Q9Y320 296 aa14.57□□□□□ -0.08
TMED1-204ENST00000588289 PPFIA3O75145 1194 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 IREB2P48200 963 aaKnown RBP14.56□□□□□ -0.08
TMED1-204ENST00000588289 STAT2P52630 851 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 MYSM1Q5VVJ2 828 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 SCYL3Q8IZE3 742 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 GPCPD1Q9NPB8 672 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 POLR3EQ9NVU0 708 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 BARHL2Q9NY43 387 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 CSADQ9Y600 493 aa14.56□□□□□ -0.08
TMED1-204ENST00000588289 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
TMED1-204ENST00000588289 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 ZBTB5O15062 677 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 EGFRP00533 1210 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 GOLGA8HP0CJ92 632 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 TRAPPC10P48553 1259 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 HTRA3P83110 453 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 LMBRD1Q9NUN5 540 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 RTEL1Q9NZ71 1219 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 FEM1BQ9UK73 627 aa14.55□□□□□ -0.08
TMED1-204ENST00000588289 CTDP1Q9Y5B0 961 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms