RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 FBXO28Q9NVF7 368 aa12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-213ENST00000587988 RLFQ13129 1914 aa12.52□□□□□ -0.4
SMARCA4-213ENST00000587988 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 AK2P54819 239 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 CCDC96Q2M329 555 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 NUP133Q8WUM0 1156 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 DCAF4Q8WV16 495 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 GPCPD1Q9NPB8 672 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 RNF186Q9NXI6 227 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 SLC45A1Q9Y2W3 748 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
SMARCA4-213ENST00000587988 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 PEX10O60683 326 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 TRPA1O75762 1119 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 FLOT1O75955 427 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 DDAH1O94760 285 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 PARP1P09874 1014 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 OSBPP22059 807 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 PABPC4Q13310 644 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 GRM4Q14833 912 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 RABEP1Q15276 862 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 TAF1CQ15572 869 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 ZCCHC17Q9NP64 241 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 ISY1Q9ULR0 285 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-213ENST00000587988 PALM3A6NDB9 673 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 DSG3P32926 999 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 SLC16A2P36021 539 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 EVCP57679 992 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 CRHR2Q13324 411 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 COG2Q14746 738 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 NAP1L2Q9ULW6 460 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
SMARCA4-213ENST00000587988 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 ZBTB43O43298 467 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 CA12O43570 354 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 PLA2G6O60733 806 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 CD2BP2O95400 341 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 PDIA3P30101 505 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 CDC27P30260 824 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 STAT2P52630 851 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 SNAP25P60880 206 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 HERVK_113P62684 666 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 SLC35G1Q2M3R5 365 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 NBPF11Q86T75 865 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 ATG4CQ96DT6 458 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 ZFYVE28Q9HCC9 887 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 TXNRD2Q9NNW7 524 aa12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-213ENST00000587988 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms