RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
ATG4D-207ENST00000587256 NMT2O60551 498 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 FGRP09769 529 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
ATG4D-207ENST00000587256 UBXN2AP68543 259 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 PLS1Q14651 629 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
ATG4D-207ENST00000587256 GPR142Q7Z601 462 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 PLEKHH3Q7Z736 793 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 MKL1Q969V6 931 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 NUDT12Q9BQG2 462 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 NBPF3Q9H094 633 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
ATG4D-207ENST00000587256 PARP14Q460N5 1801 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 NEDD4P46934 1319 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
ATG4D-207ENST00000587256 RLFQ13129 1914 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 SLF1Q9BQI6 1058 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
ATG4D-207ENST00000587256 INHAP05111 366 aa17.5■□□□□ 0.39
ATG4D-207ENST00000587256 CYP2B6P20813 491 aa17.5■□□□□ 0.39
ATG4D-207ENST00000587256 MLLT1Q03111 559 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-207ENST00000587256 ESR2Q92731 530 aa17.5■□□□□ 0.39
ATG4D-207ENST00000587256 MOV10L1Q9BXT6 1211 aaKnown RBP17.5■□□□□ 0.39
ATG4D-207ENST00000587256 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
ATG4D-207ENST00000587256 DOCK3Q8IZD9 2030 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 POTEFA5A3E0 1075 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 RGS2P41220 211 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 RGS19P49795 217 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 MTFR1Q15390 333 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 APBA2Q99767 749 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 GJD2Q9UKL4 321 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-207ENST00000587256 PLXNB2O15031 1838 aa17.49■□□□□ 0.39
ATG4D-207ENST00000587256 CENPFP49454 3210 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 VWA5AO00534 786 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 SGSM2O43147 1006 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 HMGCRP04035 888 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 BMP3P12645 472 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 ERCC3P19447 782 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 SLC1A4P43007 532 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
ATG4D-207ENST00000587256 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 NCAPG2Q86XI2 1143 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 SHCBP1Q8NEM2 672 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 KIFC2Q96AC6 838 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 MTMR7Q9Y216 660 aa17.48■□□□□ 0.39
ATG4D-207ENST00000587256 KIAA0100Q14667 2235 aaKnown RBP17.47■□□□□ 0.39
ATG4D-207ENST00000587256 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 KDM4AO75164 1064 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 CCL5P13501 91 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
ATG4D-207ENST00000587256 NT5C2P49902 561 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 TMEM132BQ14DG7 1078 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 MORN1Q5T089 497 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
ATG4D-207ENST00000587256 GMCL1Q96IK5 515 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 MROH8Q9H579 483 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
ATG4D-207ENST00000587256 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
ATG4D-207ENST00000587256 TMEM232C9JQI7 657 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 TOP1P11387 765 aaKnown RBP17.46■□□□□ 0.39
ATG4D-207ENST00000587256 PTPREP23469 700 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 MCCP23508 829 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 STAT2P52630 851 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 TRIB2Q92519 343 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 KRT23Q9C075 422 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 UNC93B1Q9H1C4 597 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 TCP11L1Q9NUJ3 509 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 ADAMTS5Q9UNA0 930 aa17.46■□□□□ 0.39
ATG4D-207ENST00000587256 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
ATG4D-207ENST00000587256 ZNF236Q9UL36 1845 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 B4E1Z4 1266 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 ZBED4O75132 1171 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 SLC25A27O95847 323 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
ATG4D-207ENST00000587256 COPB2P35606 906 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 STAT3P40763 770 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 PTH1RQ03431 593 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 GRB14Q14449 540 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 RASGRP2Q7LDG7 609 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
ATG4D-207ENST00000587256 USP6NLQ92738 828 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 TMEM47Q9BQJ4 181 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 TEX13BQ9BXU2 312 aa17.45■□□□□ 0.38
ATG4D-207ENST00000587256 ZNF214Q9UL59 606 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-207ENST00000587256 EN2P19622 333 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms