RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 TMOD4Q9NZQ9 345 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 PTPRFP10586 1907 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 CXCL11O14625 94 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 BMP3P12645 472 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 HUNKP57058 714 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 SPP2Q13103 211 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 CST9Q5W186 159 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 TRIM22Q8IYM9 498 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
DNMT1-211ENST00000586988 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
DNMT1-211ENST00000586988 STK36Q9NRP7 1315 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 PALM3A6NDB9 673 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-211ENST00000586988 ZBTB48P10074 688 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-211ENST00000586988 IFNAR1P17181 557 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 CDC27P30260 824 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 SMC3Q9UQE7 1217 aa13.71□□□□□ -0.21
DNMT1-211ENST00000586988 FRMPD2Q68DX3 1309 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 VCAM1P19320 739 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 STAT2P52630 851 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 HMGCS2P54868 508 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 SNAPC2Q13487 334 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 PROCA1Q8NCQ7 364 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-211ENST00000586988 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
DNMT1-211ENST00000586988 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 A0A0G2JLL6 359 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 IRF6O14896 467 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 GOLGA8HP0CJ92 632 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 FAM83BQ5T0W9 1011 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 KCTD1Q719H9 257 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 FASTKD5Q7L8L6 764 aaKnown RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 PRRT2Q7Z6L0 340 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 SAPCD2Q86UD0 394 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 WASF1Q92558 559 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 HHIPL1Q96JK4 782 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 CWC22Q9HCG8 908 aaKnown RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
DNMT1-211ENST00000586988 ABT1Q9ULW3 272 aaKnown RBP13.69□□□□□ -0.22
DNMT1-211ENST00000586988 PLA2G6O60733 806 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-211ENST00000586988 GTF2A2P52657 109 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 NTRK3Q16288 839 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 RGMBQ6NW40 437 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 CHURC1Q8WUH1 139 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-211ENST00000586988 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 GPCPD1Q9NPB8 672 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
DNMT1-211ENST00000586988 SEC63Q9UGP8 760 aaKnown RBP13.68□□□□□ -0.22
DNMT1-211ENST00000586988 MYH6P13533 1939 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 DEXIO95424 95 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 CTDNEP1O95476 244 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 CETPP11597 493 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 PDCP20941 246 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 GJB2P29033 226 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 ZNF157P51786 506 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
DNMT1-211ENST00000586988 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 SYDE2Q5VT97 1194 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 SPRYD7Q5W111 196 aa13.67□□□□□ -0.22
DNMT1-211ENST00000586988 BTNL9Q6UXG8 535 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms