RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 SREBF2Q12772 1141 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 TPRNQ4KMQ1 711 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 C12orf60Q5U649 245 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 STK11IPQ8N1F8 1099 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 WASF1Q92558 559 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 ZIC5Q96T25 663 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 ZKSCAN3Q9BRR0 538 aa21.4■■□□□ 1.02
RETREG3-205ENST00000586870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.4■■□□□ 1.02
RETREG3-205ENST00000586870 BAZ2AQ9UIF9 1905 aaKnown RBP21.4■■□□□ 1.02
RETREG3-205ENST00000586870 LAMB1P07942 1786 aa21.39■■□□□ 1.02
RETREG3-205ENST00000586870 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.01
RETREG3-205ENST00000586870 MANSC4A6NHS7 340 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-205ENST00000586870 SSRP1Q08945 709 aaKnown RBP21.39■■□□□ 1.01
RETREG3-205ENST00000586870 RTN1Q16799 776 aa21.39■■□□□ 1.01
RETREG3-205ENST00000586870 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-205ENST00000586870 PGBD1Q96JS3 809 aa21.39■■□□□ 1.01
RETREG3-205ENST00000586870 SWAP70Q9UH65 585 aa21.39■■□□□ 1.01
RETREG3-205ENST00000586870 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
RETREG3-205ENST00000586870 TNKSO95271 1327 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 FMNL1O95466 1100 aaPredicted RBP21.38■■□□□ 1.01
RETREG3-205ENST00000586870 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 IQCA1Q86XH1 822 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 CCDC144CPQ8IYA2 1237 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 ZNF654Q8IZM8 581 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 DYNLL2Q96FJ2 89 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 USP28Q96RU2 1077 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
RETREG3-205ENST00000586870 MYL10Q9BUA6 226 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 CABP5Q9NP86 173 aa21.38■■□□□ 1.01
RETREG3-205ENST00000586870 DDX19AQ9NUU7 478 aaKnown RBP21.38■■□□□ 1.01
RETREG3-205ENST00000586870 GDF11O95390 407 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 PTPRAP18433 802 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 GTF2A2P52657 109 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 INHBEP58166 350 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 CCDC173Q0VFZ6 552 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 PPIL2Q13356 520 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 TAOK2Q9UL54 1235 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 RANBP6O60518 1105 aaKnown RBP21.37■■□□□ 1.01
RETREG3-205ENST00000586870 ASNSP08243 561 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 LIG1P18858 919 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 GJA5P36382 358 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 FANCBQ8NB91 859 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 PPP1R9BQ96SB3 815 aa21.37■■□□□ 1.01
RETREG3-205ENST00000586870 MPHOSPH10O00566 681 aaKnown RBP21.36■■□□□ 1.01
RETREG3-205ENST00000586870 IRF6O14896 467 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 PDE4BQ07343 736 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 SNAPC2Q13487 334 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 TRIM29Q14134 588 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 TRIM22Q8IYM9 498 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 BICD2Q8TD16 824 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 PHKBQ93100 1093 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 ZNF287Q9HBT7 754 aa21.36■■□□□ 1.01
RETREG3-205ENST00000586870 USP17L5A8MUK1 530 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 SMIM22K7EJ46 135 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 EVX2Q03828 476 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 GABPAQ06546 454 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 RRP1BQ14684 758 aaKnown RBP21.35■■□□□ 1.01
RETREG3-205ENST00000586870 ABCB5Q2M3G0 1257 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 KRT40Q6A162 431 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 SLC26A6Q9BXS9 759 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 NUP62CLQ9H1M0 184 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 AS3MTQ9HBK9 375 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 GINM1Q9NU53 330 aa21.35■■□□□ 1.01
RETREG3-205ENST00000586870 CALM1P0DP23 149 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CALM2P0DP24 149 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CALM3P0DP25 149 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CETPP11597 493 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 SHMT1P34896 483 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CDK8P49336 464 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CEBPZQ03701 1054 aaKnown RBP21.34■■□□□ 1.01
RETREG3-205ENST00000586870 MYSM1Q5VVJ2 828 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 ENAHQ8N8S7 591 aaPredicted RBP21.34■■□□□ 1.01
RETREG3-205ENST00000586870 SLC44A5Q8NCS7 719 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 PCNTO95613 3336 aa21.34■■□□□ 1.01
RETREG3-205ENST00000586870 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 YEATS4O95619 227 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 GH2P01242 217 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 TM4SF4P48230 202 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 CCL15Q16663 113 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 UVSSAQ2YD98 709 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
RETREG3-205ENST00000586870 C16orf86Q6ZW13 317 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 CATIPQ7Z7H3 387 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 FUCA2Q9BTY2 467 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 POLR3EQ9NVU0 708 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 WBP1LQ9NX94 342 aa21.33■■□□□ 1.01
RETREG3-205ENST00000586870 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.33■■□□□ 1.01
RETREG3-205ENST00000586870 TRIM75PA6NK02 468 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 PRDM1O75626 825 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 DEXIO95424 95 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 HSPA1AP0DMV8 641 aaKnown RBP21.33■■□□□ 1
RETREG3-205ENST00000586870 HSPA1BP0DMV9 641 aaKnown RBP21.33■■□□□ 1
RETREG3-205ENST00000586870 CCDC84Q86UT8 332 aaPredicted RBP21.33■■□□□ 1
RETREG3-205ENST00000586870 NUP133Q8WUM0 1156 aa21.33■■□□□ 1
RETREG3-205ENST00000586870 AIFM3Q96NN9 605 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms