RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 MYH4Q9Y623 1939 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 CAVIN2O95810 425 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 SNHG28P0DPA3 235 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 TRAPPC10P48553 1259 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 DALRD3Q5D0E6 543 aaKnown RBP25.54■■□□□ 1.68
CIRBP-208ENST00000586548 RASGRP2Q7LDG7 609 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 DAGLBQ8NCG7 672 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 PRMT6Q96LA8 375 aaPredicted RBP25.54■■□□□ 1.68
CIRBP-208ENST00000586548 SDF4Q9BRK5 362 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 BARHL2Q9NY43 387 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 ZNRF3Q9ULT6 936 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 PCDHA4Q9UN74 947 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 FER1L6Q2WGJ9 1857 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 USP17L5A8MUK1 530 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 ANO6Q4KMQ2 910 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 WWC2Q6AWC2 1192 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 METTL16Q86W50 562 aaKnown RBP25.54■■□□□ 1.68
CIRBP-208ENST00000586548 BLIDQ8IZY5 108 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 ZNF579Q8NAF0 562 aaKnown RBP25.54■■□□□ 1.68
CIRBP-208ENST00000586548 CLIC6Q96NY7 704 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 TRIM34Q9BYJ4 488 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 CLIP2Q9UDT6 1046 aa25.54■■□□□ 1.68
CIRBP-208ENST00000586548 STXBP3O00186 592 aa25.53■■□□□ 1.68
CIRBP-208ENST00000586548 MPHOSPH10O00566 681 aaKnown RBP25.53■■□□□ 1.68
CIRBP-208ENST00000586548 ATP2B1P20020 1258 aa25.53■■□□□ 1.68
CIRBP-208ENST00000586548 SYKP43405 635 aa25.53■■□□□ 1.68
CIRBP-208ENST00000586548 LRRC47Q8N1G4 583 aaKnown RBP25.53■■□□□ 1.68
CIRBP-208ENST00000586548 RRP36Q96EU6 259 aaKnown RBP25.53■■□□□ 1.68
CIRBP-208ENST00000586548 TMOD2Q9NZR1 351 aa25.53■■□□□ 1.68
CIRBP-208ENST00000586548 SRPRBQ9Y5M8 271 aaKnown RBP25.53■■□□□ 1.68
CIRBP-208ENST00000586548 SPDYE2BA6NHP3 402 aa25.52■■□□□ 1.68
CIRBP-208ENST00000586548 SPDYE6P0CI01 402 aa25.52■■□□□ 1.68
CIRBP-208ENST00000586548 HEATR3Q7Z4Q2 680 aa25.52■■□□□ 1.68
CIRBP-208ENST00000586548 EIF6P56537 245 aaKnown RBP25.51■■□□□ 1.68
CIRBP-208ENST00000586548 STX1AQ16623 288 aa25.51■■□□□ 1.68
CIRBP-208ENST00000586548 CERKLQ49MI3 558 aaPredicted RBP25.51■■□□□ 1.68
CIRBP-208ENST00000586548 TATDN1Q6P1N9 297 aa25.51■■□□□ 1.68
CIRBP-208ENST00000586548 CLEC10AQ8IUN9 316 aa25.51■■□□□ 1.68
CIRBP-208ENST00000586548 AGBL3Q8NEM8 1001 aa25.51■■□□□ 1.68
CIRBP-208ENST00000586548 CCDC12Q8WUD4 166 aaPredicted RBP25.51■■□□□ 1.68
CIRBP-208ENST00000586548 TRIM44Q96DX7 344 aaPredicted RBP25.51■■□□□ 1.68
CIRBP-208ENST00000586548 RIOX1Q9H6W3 641 aa25.51■■□□□ 1.68
CIRBP-208ENST00000586548 TTC38Q5R3I4 469 aa25.51■■□□□ 1.67
CIRBP-208ENST00000586548 TYW1BQ6NUM6 668 aa25.51■■□□□ 1.67
CIRBP-208ENST00000586548 OGFOD1Q8N543 542 aa25.51■■□□□ 1.67
CIRBP-208ENST00000586548 SEC63Q9UGP8 760 aaKnown RBP25.51■■□□□ 1.67
CIRBP-208ENST00000586548 DLGAP5Q15398 846 aa25.5■■□□□ 1.67
CIRBP-208ENST00000586548 NOM1Q5C9Z4 860 aaKnown RBP25.5■■□□□ 1.67
CIRBP-208ENST00000586548 PIK3AP1Q6ZUJ8 805 aa25.5■■□□□ 1.67
CIRBP-208ENST00000586548 hCG_1984214I3L0E3 225 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 M0R2N6 131 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 ZNF713Q8N859 430 aaPredicted RBP25.49■■□□□ 1.67
CIRBP-208ENST00000586548 TAOK3Q9H2K8 898 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 CPVLQ9H3G5 476 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 FAM13BQ9NYF5 915 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 FAM196BA6NMK8 535 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 ZNF543Q08ER8 600 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 R3HDM1Q15032 1099 aaKnown RBP25.49■■□□□ 1.67
CIRBP-208ENST00000586548 CBX8Q9HC52 389 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 ANO10Q9NW15 660 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 NYAP2Q9P242 653 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 KIAA1468Q9P260 1216 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 KCNH3Q9ULD8 1083 aa25.49■■□□□ 1.67
CIRBP-208ENST00000586548 SLURP2P0DP57 97 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 GPATCH4Q5T3I0 446 aaKnown RBP25.48■■□□□ 1.67
CIRBP-208ENST00000586548 MTMR14Q8NCE2 650 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 FERMT2Q96AC1 680 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 ZMYND12Q9H0C1 365 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 DNAJC25Q9H1X3 360 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 KANSL2Q9H9L4 492 aa25.48■■□□□ 1.67
CIRBP-208ENST00000586548 ZNF70Q9UC06 446 aaPredicted RBP25.48■■□□□ 1.67
CIRBP-208ENST00000586548 FRMPD2Q68DX3 1309 aaPredicted RBP25.48■■□□□ 1.67
CIRBP-208ENST00000586548 ADAMTS3O15072 1205 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 TMEM179Q6ZVK1 233 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 MKL1Q969V6 931 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 PIGSQ96S52 555 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 USP25Q9UHP3 1055 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 ZBTB12Q9Y330 459 aaPredicted RBP25.47■■□□□ 1.67
CIRBP-208ENST00000586548 CD2APQ9Y5K6 639 aa25.47■■□□□ 1.67
CIRBP-208ENST00000586548 WNT7AO00755 349 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 ZNF165P49910 485 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 NAPAP54920 295 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 ATP2C1P98194 919 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-208ENST00000586548 GRIN1Q05586 938 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 SPDYE2Q495Y8 402 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 HOMER1Q86YM7 354 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 SGIP1Q9BQI5 828 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 UBA5Q9GZZ9 404 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 ATP2B2Q01814 1243 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 CXCL9Q07325 125 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 ZNF174Q15697 407 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 FKBP1CQ5VVH2 108 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 ELOA2Q8IYF1 753 aaPredicted RBP25.46■■□□□ 1.67
CIRBP-208ENST00000586548 CSRNP1Q96S65 589 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 HERC5Q9UII4 1024 aaKnown RBP25.46■■□□□ 1.67
CIRBP-208ENST00000586548 PCDHA6Q9UN73 950 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 PCDHA8Q9Y5H6 950 aa25.46■■□□□ 1.67
CIRBP-208ENST00000586548 CCDC194A0A1B0GVG4 234 aa25.45■■□□□ 1.66
CIRBP-208ENST00000586548 ESYT2A0FGR8 921 aa25.45■■□□□ 1.66
CIRBP-208ENST00000586548 PSDA5PKW4 1024 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms