RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
UBBP4-202ENST00000584755 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
UBBP4-202ENST00000584755 ZNF112Q9UJU3 913 aa16.16■□□□□ 0.18
UBBP4-202ENST00000584755 MTMR7Q9Y216 660 aa16.16■□□□□ 0.18
UBBP4-202ENST00000584755 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
UBBP4-202ENST00000584755 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 BAZ2BQ9UIF8 2168 aaKnown RBP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 A0A1W2PRG0 241 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 F5H6K3 240 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 SOCS7O14512 581 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 CTNND1O60716 968 aaKnown RBP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 ASNSP08243 561 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 KLRC3Q07444 240 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 SAFBQ15424 915 aaKnown RBP eCLIP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 NPY5RQ15761 445 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 MYSM1Q5VVJ2 828 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 DCAF15Q66K64 600 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
UBBP4-202ENST00000584755 ARHGEF10LQ9HCE6 1279 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 VPS54Q9P1Q0 977 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
UBBP4-202ENST00000584755 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 FIBPO43427 364 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
UBBP4-202ENST00000584755 KLHL40Q2TBA0 621 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
UBBP4-202ENST00000584755 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 FRMPD2Q68DX3 1309 aaPredicted RBP16.14■□□□□ 0.17
UBBP4-202ENST00000584755 SSC5DA1L4H1 1573 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 SCN4AP35499 1836 aa16.14■□□□□ 0.17
UBBP4-202ENST00000584755 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 hCG_1984214I3L0E3 225 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 NDUFB10O96000 172 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
UBBP4-202ENST00000584755 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 ZNF713Q8N859 430 aaPredicted RBP16.13■□□□□ 0.17
UBBP4-202ENST00000584755 RRP36Q96EU6 259 aaKnown RBP16.13■□□□□ 0.17
UBBP4-202ENST00000584755 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
UBBP4-202ENST00000584755 RCOR1Q9UKL0 485 aa16.13■□□□□ 0.17
UBBP4-202ENST00000584755 SLC1A4P43007 532 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 WWC2Q6AWC2 1192 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 ACER1Q8TDN7 264 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
UBBP4-202ENST00000584755 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 UBA5Q9GZZ9 404 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 SH2D4AQ9H788 454 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 GPCPD1Q9NPB8 672 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 POLR3EQ9NVU0 708 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 WDR90Q96KV7 1748 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
UBBP4-202ENST00000584755 STXBP3O00186 592 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
UBBP4-202ENST00000584755 MBD3O95983 291 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 CALML3P27482 149 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 KRT2P35908 639 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 ECE1P42892 770 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
UBBP4-202ENST00000584755 UBE2HP62256 183 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 TTBK2Q6IQ55 1244 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 DAGLBQ8NCG7 672 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 CCDC148Q8NFR7 591 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 SPATA32Q96LK8 384 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 PIGSQ96S52 555 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
UBBP4-202ENST00000584755 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
UBBP4-202ENST00000584755 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
UBBP4-202ENST00000584755 EPHX2P34913 555 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 SUPT20HL1Q3ZLR7 823 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 VCPKMTQ9H867 229 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 GOPCQ9HD26 462 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 YEATS4O95619 227 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 BMP3P12645 472 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 NR5A1Q13285 461 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
UBBP4-202ENST00000584755 DCPSQ96C86 337 aaKnown RBP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBBP4-202ENST00000584755 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 2428.2 ms