RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-207ENST00000583965 RAD21O60216 631 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 PLA2G6O60733 806 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 PFKFB2O60825 505 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 CD2BP2O95400 341 aaKnown RBP13.59□□□□□ -0.23
CDRT1-207ENST00000583965 BMP3P12645 472 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 VCAM1P19320 739 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 GNAQP50148 359 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 INHBEP58166 350 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 ZNF543Q08ER8 600 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 RTN1Q16799 776 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 KIAA1755Q5JYT7 1200 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 MYL10Q9BUA6 226 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
CDRT1-207ENST00000583965 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 THSD7BQ9C0I4 1608 aa13.59□□□□□ -0.23
CDRT1-207ENST00000583965 TESPA1A2RU30 521 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 PALM3A6NDB9 673 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 DHX16O60231 1041 aaKnown RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 NOGQ13253 232 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 PABPC4Q13310 644 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 ME3Q16798 604 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 GADL1Q6ZQY3 521 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 CHURC1Q8WUH1 139 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
CDRT1-207ENST00000583965 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 FEM1BQ9UK73 627 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
CDRT1-207ENST00000583965 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 HSPA6P17066 643 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 SMARCA1P28370 1054 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 MOGSQ13724 837 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 CCL15Q16663 113 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 FAM160B2Q86V87 743 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
CDRT1-207ENST00000583965 SLC45A1Q9Y2W3 748 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
CDRT1-207ENST00000583965 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 LARGE1O95461 756 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 RXRAP19793 462 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 STAT2P52630 851 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 CCT2P78371 535 aaKnown RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 SCRN1Q12765 414 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 STK3Q13188 491 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 BECN1Q14457 450 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 CPLX2Q6PUV4 134 aaKnown RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 CATSPERGQ6ZRH7 1159 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 ANKRD23Q86SG2 305 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 CCDC144CPQ8IYA2 1237 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 NUP88Q99567 741 aaPredicted RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
CDRT1-207ENST00000583965 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
CDRT1-207ENST00000583965 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 CPLX1O14810 134 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 CDKL5O76039 1030 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 GOLGA8HP0CJ92 632 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 FDX1P10109 184 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 CDC27P30260 824 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-207ENST00000583965 DGKZQ13574 1117 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 GPAT2Q6NUI2 795 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 RASGRP2Q7LDG7 609 aa13.55□□□□□ -0.24
CDRT1-207ENST00000583965 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms