RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 KIFC2Q96AC6 838 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 MRGPRX2Q96LB1 330 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 DHX36Q9H2U1 1008 aaKnown RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 TXNRD2Q9NNW7 524 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 SMC4Q9NTJ3 1288 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 TMOD4Q9NZQ9 345 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 HMG20BQ9P0W2 317 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
VAPA-207ENST00000583879 NOB1Q9ULX3 412 aaKnown RBP6.57□□□□□ -1.36
VAPA-207ENST00000583879 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 PFASO15067 1338 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 J3QL48 77 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 SRGAP3O43295 1099 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 PEX10O60683 326 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 MAPK4P31152 587 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 RGS2P41220 211 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 HERVK_113P62684 666 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 JAG1P78504 1218 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 MTMR2Q13614 643 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 LRRC26Q2I0M4 334 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 GORABQ5T7V8 394 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 FAM109BQ6ICB4 259 aaPredicted RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 CCAR1Q8IX12 1150 aaKnown RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 MEIS3Q99687 375 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 COL25A1Q9BXS0 654 aaPredicted RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 API5Q9BZZ5 524 aaKnown RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
VAPA-207ENST00000583879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.56□□□□□ -1.36
VAPA-207ENST00000583879 A0A0C4DFX4 3053 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 BAG3O95817 575 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 UQCRFS1P1P0C7P4 283 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 ZKSCAN1P17029 563 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 ARID4AP29374 1257 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 CCND3P30281 292 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 ERVK-9P63128 1117 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 ERVK-24P63145 666 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 MDM2Q00987 491 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 MTX1Q13505 466 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 CCL14Q16627 93 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 PI16Q6UXB8 463 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 GPR142Q7Z601 462 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 PLEKHH3Q7Z736 793 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
VAPA-207ENST00000583879 TRMT2AQ8IZ69 625 aaKnown RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 SH3RF3Q8TEJ3 882 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 GTF3C2Q8WUA4 911 aaPredicted RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 NLRP7Q8WX94 980 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 EDC3Q96F86 508 aaKnown RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 NOL10Q9BSC4 688 aaKnown RBP6.55□□□□□ -1.36
VAPA-207ENST00000583879 PORCNQ9H237 461 aa6.55□□□□□ -1.36
VAPA-207ENST00000583879 COL2A1P02458 1487 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 FAM181BA6NEQ2 426 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 IGSF3O75054 1194 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 GLRX3O76003 335 aaKnown RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 GNAI3P08754 354 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 CT47B1P0C2W7 299 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 MCAMP43121 646 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 MMP16P51512 607 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 MAP2K5Q13163 448 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 G3BP1Q13283 466 aaKnown RBP eCLIP6.54□□□□□ -1.362e-6■■■■□ 24.6
VAPA-207ENST00000583879 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 NAA16Q6N069 864 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 USP17L2Q6R6M4 530 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 MAPKAPK5Q8IW41 473 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 CRACR2BQ8N4Y2 399 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 TGFBRAP1Q8WUH2 860 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 ARHGAP45Q92619 1136 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 HPS1Q92902 700 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 LBHD1Q9BQE6 289 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
VAPA-207ENST00000583879 DNAJC18Q9H819 358 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 AATFQ9NY61 560 aaKnown RBP eCLIP6.54□□□□□ -1.36
VAPA-207ENST00000583879 PALD1Q9ULE6 856 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 RABGAP1Q9Y3P9 1069 aa6.54□□□□□ -1.36
VAPA-207ENST00000583879 USP17L15C9J2P7 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L13C9JLJ4 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L11C9JVI0 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L18D6R9N7 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L22D6RA61 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L17D6RBQ6 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L19D6RCP7 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L20D6RJB6 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 MSCO60682 206 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 GDF11O95390 407 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 CCNA1P78396 465 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 ATP2B2Q01814 1243 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 USP17L24Q0WX57 530 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 SHROOM1Q2M3G4 852 aaPredicted RBP6.53□□□□□ -1.36
VAPA-207ENST00000583879 MFSD14CQ5VZR4 134 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 ATF7IPQ6VMQ6 1270 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 LPAR1Q92633 364 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 C12orf42Q96LP6 360 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms