RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 TRIM75PA6NK02 468 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
ITGB4-209ENST00000583327 IFNAR1P17181 557 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 KIF5BP33176 963 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 GNAQP50148 359 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 BECN1Q14457 450 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 GPATCH4Q5T3I0 446 aaKnown RBP15.92■□□□□ 0.14
ITGB4-209ENST00000583327 SPRYD7Q5W111 196 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 NBPF11Q86T75 865 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 RAB11FIP4Q86YS3 637 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 SRBD1Q8N5C6 995 aaKnown RBP15.92■□□□□ 0.14
ITGB4-209ENST00000583327 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 LLPHQ9BRT6 129 aaKnown RBP15.92■□□□□ 0.14
ITGB4-209ENST00000583327 RIOX1Q9H6W3 641 aa15.92■□□□□ 0.14
ITGB4-209ENST00000583327 WDR46O15213 610 aaKnown RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 ZBTB48P10074 688 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 BMP3P12645 472 aa15.91■□□□□ 0.14
ITGB4-209ENST00000583327 RGMBQ6NW40 437 aa15.91■□□□□ 0.14
ITGB4-209ENST00000583327 PROCA1Q8NCQ7 364 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 NSUN7Q8NE18 718 aaKnown RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 CTCFLQ8NI51 663 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-209ENST00000583327 MTMR8Q96EF0 704 aa15.91■□□□□ 0.14
ITGB4-209ENST00000583327 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
ITGB4-209ENST00000583327 TESPA1A2RU30 521 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-209ENST00000583327 FAM155AB1AL88 458 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-209ENST00000583327 KLRF2D3W0D1 207 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 CYTH3O43739 400 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 PLEKHA8P1O95397 391 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 GOLGA8HP0CJ92 632 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 SLC1A4P43007 532 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 APLP1P51693 650 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 HMGCS2P54868 508 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 DGKZQ13574 1117 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 RASAL3Q86YV0 1011 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 CCDC83Q8IWF9 413 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 CCDC144CPQ8IYA2 1237 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 FEZ1Q99689 392 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
ITGB4-209ENST00000583327 SLC10A3P09131 477 aa15.89■□□□□ 0.13
ITGB4-209ENST00000583327 FDPSP14324 419 aaKnown RBP15.89■□□□□ 0.13
ITGB4-209ENST00000583327 VCAM1P19320 739 aa15.89■□□□□ 0.13
ITGB4-209ENST00000583327 HOXA7P31268 230 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-209ENST00000583327 ZYXQ15942 572 aaKnown RBP15.89■□□□□ 0.13
ITGB4-209ENST00000583327 GPAT2Q6NUI2 795 aa15.89■□□□□ 0.13
ITGB4-209ENST00000583327 KCTD1Q719H9 257 aa15.89■□□□□ 0.13
ITGB4-209ENST00000583327 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
ITGB4-209ENST00000583327 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-209ENST00000583327 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
ITGB4-209ENST00000583327 RASSF10A6NK89 507 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 PRPF3O43395 683 aaKnown RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 ZNF157P51786 506 aaPredicted RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 GTF2A2P52657 109 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 SNAPC2Q13487 334 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 CATSPERGQ6ZRH7 1159 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 FASTKD5Q7L8L6 764 aaKnown RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 CCDC102AQ96A19 550 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 FEM1BQ9UK73 627 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 ADAMTS5Q9UNA0 930 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 FRMPD2Q68DX3 1309 aaPredicted RBP15.88■□□□□ 0.13
ITGB4-209ENST00000583327 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
ITGB4-209ENST00000583327 TMEM232C9JQI7 657 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
ITGB4-209ENST00000583327 FAM160B2Q86V87 743 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 CHURC1Q8WUH1 139 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
ITGB4-209ENST00000583327 UBA5Q9GZZ9 404 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 RPAP3Q9H6T3 665 aaPredicted RBP15.87■□□□□ 0.13
ITGB4-209ENST00000583327 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.87■□□□□ 0.13
ITGB4-209ENST00000583327 PTPRFP10586 1907 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 LOC285556D6RIA3 1793 aa15.87■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L15C9J2P7 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L13C9JLJ4 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L11C9JVI0 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L18D6R9N7 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L22D6RA61 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L17D6RBQ6 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L19D6RCP7 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L20D6RJB6 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 JAK2O60674 1132 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 CDKL5O76039 1030 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 CETPP11597 493 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 SLC4A3P48751 1232 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 USP17L24Q0WX57 530 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 PKN1Q16512 942 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 CCDC96Q2M329 555 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms