RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 AS3MTQ9HBK9 375 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 CIB2O75838 187 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 SPATA1Q5VX52 437 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 STAMQ92783 540 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 RASSF4Q9H2L5 321 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 ATG3Q9NT62 314 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
ERBB2-214ENST00000583038 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 UAP1Q16222 522 aaPredicted RBP18.1■□□□□ 0.49
ERBB2-214ENST00000583038 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 CCDC105Q8IYK2 499 aa18.1■□□□□ 0.49
ERBB2-214ENST00000583038 LAD1O00515 517 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 DAPK3O43293 454 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 ARHGAP25P42331 645 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 DDX23Q9BUQ8 820 aaKnown RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 TCP1P17987 556 aaKnown RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 NT5C2P49902 561 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 ETF1P62495 437 aaKnown RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 TCP10Q12799 353 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 MORC3Q14149 939 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 ZMYM1Q5SVZ6 1142 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 GPBP1Q86WP2 473 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 AFAP1L2Q8N4X5 818 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 CCDC17Q96LX7 622 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 HAUS2Q9NVX0 235 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 RTEL1Q9NZ71 1219 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 NR1I2O75469 434 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 LTKP29376 864 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 ITIH3Q06033 890 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 MIER3Q7Z3K6 550 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 KRT26Q7Z3Y9 468 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 RNF34Q969K3 372 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 LSG1Q9H089 658 aaKnown RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 MLH3Q9UHC1 1453 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 hCG_1642624A0A1W2PR95 340 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 HACE1Q8IYU2 909 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 CFAP57Q96MR6 1250 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 TBC1D7Q9P0N9 293 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 BIN2Q9UBW5 565 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-214ENST00000583038 COL4A3BPQ9Y5P4 624 aa18.09■□□□□ 0.49
ERBB2-214ENST00000583038 TYW1BQ6NUM6 668 aa18.08■□□□□ 0.49
ERBB2-214ENST00000583038 RSRC1Q96IZ7 334 aaKnown RBP18.08■□□□□ 0.49
ERBB2-214ENST00000583038 RNF26Q9BY78 433 aaPredicted RBP18.08■□□□□ 0.49
ERBB2-214ENST00000583038 NLRC4Q9NPP4 1024 aa18.08■□□□□ 0.49
ERBB2-214ENST00000583038 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.49
ERBB2-214ENST00000583038 PCDHA7Q9UN72 937 aa18.08■□□□□ 0.49
ERBB2-214ENST00000583038 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
ERBB2-214ENST00000583038 DDX39AO00148 427 aaKnown RBP18.08■□□□□ 0.48
ERBB2-214ENST00000583038 ZNF500O60304 480 aaPredicted RBP18.08■□□□□ 0.48
ERBB2-214ENST00000583038 RNASE9P60153 205 aaKnown RBP18.08■□□□□ 0.48
ERBB2-214ENST00000583038 TPH2Q8IWU9 490 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 HYOU1Q9Y4L1 999 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.485e-6■□□□□ 9.7
ERBB2-214ENST00000583038 KLHL7Q8IXQ5 586 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 ARHGAP24Q8N264 748 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 GSDMAQ96QA5 445 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 MKRN1Q9UHC7 482 aaKnown RBP18.08■□□□□ 0.48
ERBB2-214ENST00000583038 PPIP5K2O43314 1243 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 TMC4Q7Z404 712 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
ERBB2-214ENST00000583038 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 BTBD18B2RXH4 712 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 IRX3P78415 501 aaPredicted RBP18.07■□□□□ 0.48
ERBB2-214ENST00000583038 PPP1R21Q6ZMI0 780 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 TRIM37O94972 964 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 GYG1P46976 350 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 DCAF15Q66K64 600 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 CCT6BQ92526 530 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 FOXP1Q9H334 677 aaPredicted RBP18.07■□□□□ 0.48
ERBB2-214ENST00000583038 ATP11AP98196 1134 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 RASA3Q14644 834 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 MAEAQ7L5Y9 396 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 CABS1Q96KC9 395 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 TRIM31Q9BZY9 425 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 MIS12Q9H081 205 aa18.07■□□□□ 0.48
ERBB2-214ENST00000583038 PPP6R2O75170 966 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 CHRNDQ07001 517 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 DEPTORQ8TB45 409 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 P3H4Q92791 437 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 TNNI1P19237 187 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 HOXA7P31268 230 aaPredicted RBP18.06■□□□□ 0.48
ERBB2-214ENST00000583038 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 LRRC24Q50LG9 513 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
ERBB2-214ENST00000583038 HHATQ5VTY9 493 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 VPS52Q8N1B4 723 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 USP21Q9UK80 565 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 PLEKHG1Q9ULL1 1385 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 RAD51AP2Q09MP3 1159 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 FBXO11Q86XK2 927 aa18.06■□□□□ 0.48
ERBB2-214ENST00000583038 CARD10Q9BWT7 1032 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms