RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CEP131Q9UPN4 1083 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 SCAF8Q9UPN6 1271 aaKnown RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
SS18-220ENST00000582092 V9GY48 417 aaPredicted RBP10.7□□□□□ -0.7
SS18-220ENST00000582092 ROBO3Q96MS0 1386 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 TCHHQ07283 1943 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 TCP10L2B9ZVM9 353 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 UBE2Q2LH0YL09 131 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 SMIM22K7EJ46 135 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 YEATS4O95619 227 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 TOP1P11387 765 aaKnown RBP10.69□□□□□ -0.7
SS18-220ENST00000582092 RASA1P20936 1047 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 KIF23Q02241 960 aaPredicted RBP10.69□□□□□ -0.7
SS18-220ENST00000582092 PRKG1Q13976 671 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 FKBP1CQ5VVH2 108 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 MYSM1Q5VVJ2 828 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 CCAR1Q8IX12 1150 aaKnown RBP10.69□□□□□ -0.7
SS18-220ENST00000582092 TNS4Q8IZW8 715 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 SLC10A4Q96EP9 437 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 NUP62CLQ9H1M0 184 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 TNMDQ9H2S6 317 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
SS18-220ENST00000582092 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
SS18-220ENST00000582092 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 LAMB1P07942 1786 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 SPTLC2O15270 562 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 KINO60870 393 aaKnown RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 MMP1P03956 469 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 PARP1P09874 1014 aaKnown RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 KRT2P35908 639 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 LBX1P52954 281 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 NLRP5P59047 1200 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 SREBF2Q12772 1141 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 TCP10Q12799 353 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 ANO1Q5XXA6 986 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 ANKRD13AQ8IZ07 590 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 SLC44A5Q8NCS7 719 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 AIFM3Q96NN9 605 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 USP28Q96RU2 1077 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
SS18-220ENST00000582092 OSBPL5Q9H0X9 879 aaPredicted RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 FOXP1Q9H334 677 aaPredicted RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 PI4KBQ9UBF8 816 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 SEC63Q9UGP8 760 aaKnown RBP10.68□□□□□ -0.7
SS18-220ENST00000582092 PCDHAC2Q9Y5I4 1007 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 CASP8AP2Q9UKL3 1982 aa10.68□□□□□ -0.7
SS18-220ENST00000582092 FAM155AB1AL88 458 aaPredicted RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 CTAGE5O15320 804 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 PLEKHA8P1O95397 391 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 CCDC192P0DO97 292 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 CALML3P27482 149 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 INHBEP58166 350 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 TROAPQ12815 778 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 GRM4Q14833 912 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 COL13A1Q5TAT6 717 aaPredicted RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 DCAF15Q66K64 600 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 SASS6Q6UVJ0 657 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 RASAL3Q86YV0 1011 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 FOXP4Q8IVH2 680 aaPredicted RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 DIS3L2Q8IYB7 885 aaKnown RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 CCDC12Q8WUD4 166 aaPredicted RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 PIBF1Q8WXW3 757 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 RRP36Q96EU6 259 aaKnown RBP10.67□□□□□ -0.7
SS18-220ENST00000582092 TMEM47Q9BQJ4 181 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 SAGE1Q9NXZ1 904 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 CSADQ9Y600 493 aa10.67□□□□□ -0.7
SS18-220ENST00000582092 MYH1P12882 1939 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 ENTPD3O75355 529 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
SS18-220ENST00000582092 TTLL1O95922 423 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 SCG2P13521 617 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 U2AF2P26368 475 aaKnown RBP eCLIP10.66□□□□□ -0.76e-19■■□□□ 14.5
SS18-220ENST00000582092 EVX2Q03828 476 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 LDLRAD1Q5T700 205 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 NBPF12Q5TAG4 269 aaPredicted RBP10.66□□□□□ -0.7
SS18-220ENST00000582092 ADALQ6DHV7 355 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 FSIP1Q8NA03 581 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 CCDC148Q8NFR7 591 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 IL17RBQ9NRM6 502 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 GJB4Q9NTQ9 266 aa10.66□□□□□ -0.7
SS18-220ENST00000582092 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms