RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PTPDC1A2A3K4 754 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 FAM196BA6NMK8 535 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 CPLX1O14810 134 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 STX6O43752 255 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 PDCP20941 246 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 SYT1P21579 422 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 METTL16Q86W50 562 aaKnown RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 ZNF444Q8N0Y2 327 aaPredicted RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 DDX11Q96FC9 970 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 PARK7Q99497 189 aaKnown RBP14.66□□□□□ -0.06
SRSF1-204ENST00000581979 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 ARHGAP39Q9C0H5 1083 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 CPA4Q9UI42 421 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 SLC45A1Q9Y2W3 748 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 PDE4DIPQ5VU43 2346 aa14.66□□□□□ -0.06
SRSF1-204ENST00000581979 GOLGA8AA7E2F4 631 aa14.65□□□□□ -0.06
SRSF1-204ENST00000581979 HMGN5P82970 282 aaKnown RBP14.65□□□□□ -0.06
SRSF1-204ENST00000581979 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
SRSF1-204ENST00000581979 MICU3Q86XE3 530 aa14.65□□□□□ -0.06
SRSF1-204ENST00000581979 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 PDIA4P13667 645 aaKnown RBP14.64□□□□□ -0.07
SRSF1-204ENST00000581979 RXRAP19793 462 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 MCM4P33991 863 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 CAP2P40123 477 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 PRMT2P55345 433 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 TFAP4Q01664 338 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 SEC23AQ15436 765 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 IFIT1BQ5T764 474 aaKnown RBP14.64□□□□□ -0.07
SRSF1-204ENST00000581979 C16orf86Q6ZW13 317 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 ENAHQ8N8S7 591 aaPredicted RBP14.64□□□□□ -0.07
SRSF1-204ENST00000581979 MYL10Q9BUA6 226 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
SRSF1-204ENST00000581979 KIF3AQ9Y496 699 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 ZSWIM8A7E2V4 1837 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
SRSF1-204ENST00000581979 RBBP6Q7Z6E9 1792 aaKnown RBP14.64□□□□□ -0.07
SRSF1-204ENST00000581979 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 ZSCAN22P10073 491 aaPredicted RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CYP2C8P10632 490 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 BCRP11274 1271 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CDK8P49336 464 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CPLX2Q6PUV4 134 aaKnown RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 ZNF333Q96JL9 665 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 KIAA0100Q14667 2235 aaKnown RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 BAG4O95429 457 aaKnown RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CTGFP29279 349 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 NBPF11Q86T75 865 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
SRSF1-204ENST00000581979 ZNF654Q8IZM8 581 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 BRCA2P51587 3418 aa14.63□□□□□ -0.07
SRSF1-204ENST00000581979 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 DDX11L8A8MPP1 907 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 CDKL5O76039 1030 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 RASA1P20936 1047 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 PSMC4P43686 418 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 CCDC178Q5BJE1 867 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 CATIPQ7Z7H3 387 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 ZNF280CQ8ND82 737 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 TRIM47Q96LD4 638 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 DNAJC18Q9H819 358 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 AGTPBP1Q9UPW5 1226 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 MTMR6Q9Y217 621 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 NID2Q14112 1375 aa14.62□□□□□ -0.07
SRSF1-204ENST00000581979 GOLGA6L22H0YM25 854 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 NMT2O60551 498 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 F13A1P00488 732 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 CDC27P30260 824 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 ADD1P35611 737 aaKnown RBP14.61□□□□□ -0.07
SRSF1-204ENST00000581979 RCAN1P53805 252 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 SPP2Q13103 211 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 RTN1Q16799 776 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 CLEC17AQ6ZS10 378 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
SRSF1-204ENST00000581979 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 MKI67P46013 3256 aaKnown RBP14.61□□□□□ -0.07
SRSF1-204ENST00000581979 USP17L5A8MUK1 530 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 H3BQV1 296 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 ASNSP08243 561 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 CALM1P0DP23 149 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 CALM2P0DP24 149 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 CALM3P0DP25 149 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 HOXD10P28358 340 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms