RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 MAGEB6P1A0A0J9YX57 407 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 BCAR3O75815 825 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 PGK2P07205 417 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 AKR1A1P14550 325 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 EVX2Q03828 476 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 TMEM132BQ14DG7 1078 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 CCDC129Q6ZRS4 1044 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 ANKRD33Q7Z3H0 272 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 SPICE1Q8N0Z3 855 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 NUP133Q8WUM0 1156 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 FRAT1Q92837 279 aaPredicted RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 EAF2Q96CJ1 260 aaPredicted RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.46■□□□□ 0.07
SS18-219ENST00000581570 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 STARD7Q9NQZ5 370 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 DIS3Q9Y2L1 958 aaKnown RBP15.46■□□□□ 0.07
SS18-219ENST00000581570 MYH1P12882 1939 aa15.46■□□□□ 0.07
SS18-219ENST00000581570 TIMP1P01033 207 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 ZNF865P0CJ78 1059 aaPredicted RBP15.45■□□□□ 0.06
SS18-219ENST00000581570 ACLYP53396 1101 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 KCTD2Q14681 263 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 ZNF792Q3KQV3 632 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 ASB2Q96Q27 587 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
SS18-219ENST00000581570 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
SS18-219ENST00000581570 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
SS18-219ENST00000581570 ADAMTS4O75173 837 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 PBX2P40425 430 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 MFSD5Q6N075 450 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 CCDC174Q6PII3 467 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 RIOX2Q8IUF8 465 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 SIAH1Q8IUQ4 282 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 LENG1Q96BZ8 264 aaPredicted RBP15.44■□□□□ 0.06
SS18-219ENST00000581570 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 PRDM12Q9H4Q4 367 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 SH2D4AQ9H788 454 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 VCPKMTQ9H867 229 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 THEGQ9P2T0 379 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
SS18-219ENST00000581570 MOXD2PA6NHM9 499 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
SS18-219ENST00000581570 MRPS5P82675 430 aaKnown RBP15.43■□□□□ 0.06
SS18-219ENST00000581570 ICA1Q05084 483 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.06
SS18-219ENST00000581570 TMEM240Q5SV17 173 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 C16orf59Q7L2K0 433 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 CLEC10AQ8IUN9 316 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 TMEM57Q8N5G2 664 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 KLHDC9Q8NEP7 349 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 ADAMTS19Q8TE59 1207 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 SWAP70Q9UH65 585 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 TBX21Q9UL17 535 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 ADAMTS5Q9UNA0 930 aa15.43■□□□□ 0.06
SS18-219ENST00000581570 MYO5AQ9Y4I1 1855 aaKnown RBP15.43■□□□□ 0.06
SS18-219ENST00000581570 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 CYP2D6P10635 497 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 AKR1B1P15121 316 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 STAT3P40763 770 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 CCDC85BQ15834 202 aaPredicted RBP15.42■□□□□ 0.06
SS18-219ENST00000581570 KCNA10Q16322 511 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 SDR42E1Q8WUS8 393 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 DYNLL2Q96FJ2 89 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 SYNRGQ9UMZ2 1314 aa15.42■□□□□ 0.06
SS18-219ENST00000581570 TTC28Q96AY4 2481 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 IGFBP4P22692 258 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 COPB2P35606 906 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 PLA2G5P39877 138 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 RASIP1Q5U651 963 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 TMEM199Q8N511 208 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 IL27Q8NEV9 243 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 FAM122AQ96E09 287 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 UHRF1Q96T88 793 aaPredicted RBP15.41■□□□□ 0.06
SS18-219ENST00000581570 C1orf115Q9H7X2 142 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 DCP1AQ9NPI6 582 aaPredicted RBP15.41■□□□□ 0.06
SS18-219ENST00000581570 FBXO28Q9NVF7 368 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 MROH7Q68CQ1 1323 aa15.41■□□□□ 0.06
SS18-219ENST00000581570 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 VWA5AO00534 786 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 ACRP10323 421 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 CSF2RAP15509 400 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 PDE6AP16499 860 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 CDK7P50613 346 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
SS18-219ENST00000581570 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
SS18-219ENST00000581570 ZNF365Q70YC5 407 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 MSL3Q8N5Y2 521 aaKnown RBP15.4■□□□□ 0.06
SS18-219ENST00000581570 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 CCDC17Q96LX7 622 aa15.4■□□□□ 0.06
SS18-219ENST00000581570 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms