RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 SDSP20132 328 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 POU3F2P20265 443 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 SV2CQ496J9 727 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 FAM209AQ5JX71 171 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 LYSMD3Q7Z3D4 306 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 DDX54Q8TDD1 881 aaKnown RBP9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 SLC7A3Q8WY07 619 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 TTC1Q99614 292 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 AARSD1Q9BTE6 412 aaKnown RBP9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 FBRSQ9HAH7 460 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 LUC7LQ9NQ29 371 aaKnown RBP9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 ARHGEF4Q9NR80 690 aa9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 FBXO9Q9UK97 447 aaPredicted RBP9.69□□□□□ -0.86
SUPT4H1-207ENST00000581540 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 UPP2O95045 317 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 F2P00734 622 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 TRIM27P14373 513 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 NME1P15531 152 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 DGKGP49619 791 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 NEK4P51957 841 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 SETDB1Q15047 1291 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 BBS9Q3SYG4 887 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 SYDE2Q5VT97 1194 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 OVOS1Q6IE37 1185 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 PCGF5Q86SE9 256 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 JPH3Q8WXH2 748 aaPredicted RBP9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 ZFATQ9P243 1243 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 TRHDEQ9UKU6 1024 aa9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-207ENST00000581540 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 A0A1W2PQU0 124 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 NFKBIEO00221 500 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 TBX3O15119 743 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 ABLIM3O94929 683 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 NFKB1P19838 968 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 FLT3P36888 993 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 LMOD3Q0VAK6 560 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 ZYXQ15942 572 aaKnown RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 GNPTABQ3T906 1256 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 INO80DQ53TQ3 878 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 ACBD5Q5T8D3 534 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 KLHL6Q8WZ60 621 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 USP7Q93009 1102 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 HHIPQ96QV1 700 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 OBP2AQ9NY56 170 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 PCDHB10Q9UN67 800 aa9.67□□□□□ -0.86
SUPT4H1-207ENST00000581540 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 ACRP10323 421 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 PCDH1Q08174 1060 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 PKN3Q6P5Z2 889 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 AMOTL1Q8IY63 956 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 SPICE1Q8N0Z3 855 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 GRIN3AQ8TCU5 1115 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 PBX4Q9BYU1 374 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 TAGLN3Q9UI15 199 aa9.66□□□□□ -0.86
SUPT4H1-207ENST00000581540 VSTM5A8MXK1 200 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 TNFRSF10CO14798 259 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 FBXO21O94952 628 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 FAM157BP0CG42 384 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 PDE6BP35913 854 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 NRLP54845 237 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 TMPRSS15P98073 1019 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 ZNF252P-AS1Q0IIN9 211 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 TRIM61Q5EBN2 209 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 CNTD1Q8N815 330 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 RHOBTB2Q9BYZ6 727 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 IFT22Q9H7X7 185 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 PPCSQ9HAB8 311 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 APOBEC2Q9Y235 224 aaKnown RBP9.65□□□□□ -0.86
SUPT4H1-207ENST00000581540 GABRDO14764 452 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 DNAJC8O75937 253 aaPredicted RBP9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 ASLP04424 464 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 BDNFP23560 247 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 MAN1A1P33908 653 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 FIGNL1Q6PIW4 674 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 KRBA2Q6ZNG9 492 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 LHFPL2Q6ZUX7 228 aa9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
SUPT4H1-207ENST00000581540 SNIP1Q8TAD8 396 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms