RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 MAEAQ7L5Y9 396 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 PHLPP2Q6ZVD8 1323 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 EFCAB13Q8IY85 973 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 TRIM4Q9C037 500 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 CHL1O00533 1208 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 ADCY8P40145 1251 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 EIF6P56537 245 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 RRP15Q9Y3B9 282 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 MROH5Q6ZUA9 1318 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 ATP5JP18859 108 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 LRCH2Q5VUJ6 765 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
CSNK1D-217ENST00000581241 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 H7C1D1 291 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 STAT1P42224 750 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 LPIN2Q92539 896 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 RIC8AQ9NPQ8 531 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 DNMT1P26358 1616 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 BAG2O95816 211 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 TAF12Q16514 161 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 MYOCDQ8IZQ8 938 aa16■□□□□ 0.15
CSNK1D-217ENST00000581241 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
CSNK1D-217ENST00000581241 CCT5P48643 541 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 SPATA1Q5VX52 437 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 ABCC4O15439 1325 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 PPP2R5DQ14738 602 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 RPAINQ86UA6 219 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 TPCN1Q9ULQ1 816 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 BBOF1Q8ND07 529 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 USP28Q96RU2 1077 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 SEC31AO94979 1220 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 XRCC5P13010 732 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 CNGA1P29973 690 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 THAP12O43422 761 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 RBM26Q5T8P6 1007 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 ADCY9O60503 1353 aa15.99■□□□□ 0.15
CSNK1D-217ENST00000581241 MAST3O60307 1309 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 ZAP70P43403 619 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 TDRD7Q8NHU6 1098 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 FANCLQ9NW38 375 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 MAN1A1P33908 653 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 PPARAQ07869 468 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 AP1ARQ63HQ0 302 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 DDB1Q16531 1140 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 KIAA0232Q92628 1395 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 ZNF518AQ6AHZ1 1483 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 PRDM1O75626 825 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 ATF2P15336 505 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 NDUFA8P51970 172 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 HAUS2Q9NVX0 235 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 TPX2Q9ULW0 747 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 ARHGEF10O15013 1369 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 CLTAP09496 248 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 TTC19Q6DKK2 380 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 CCDC197Q8NCU1 140 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 PANK4Q9NVE7 773 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
CSNK1D-217ENST00000581241 LRRD1A4D1F6 860 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 SLC12A2P55011 1212 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 PTH1RQ03431 593 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 GABPAQ06546 454 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 GPBP1Q86WP2 473 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 BIN2Q9UBW5 565 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 PCDHA7Q9UN72 937 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 ABCB4P21439 1286 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 SESN3P58005 492 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 DTNBO60941 627 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 PRPF6O94906 941 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 NSMCE1Q8WV22 266 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 UFL1O94874 794 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 STMN1P16949 149 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 CTAGE3PQ8IX95 158 aa15.97■□□□□ 0.15
CSNK1D-217ENST00000581241 KRT81Q14533 505 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 REXO1Q8N1G1 1221 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 LRRC8CQ8TDW0 803 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 CLIC4Q9Y696 253 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 MAP3K19Q56UN5 1328 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 STAM2O75886 525 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 SUN1O94901 812 aa15.96■□□□□ 0.15
CSNK1D-217ENST00000581241 DBN1Q16643 649 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms