RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 PPFIBP1Q86W92 1011 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 PRDM14Q9GZV8 571 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 PCDHB12Q9Y5F1 795 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 SRFP11831 508 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 TPP2P29144 1249 aaPredicted RBP7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 IKZF1Q13422 519 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 SNW1Q13573 536 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 SF3A1Q15459 793 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 AXDND1Q5T1B0 1012 aaPredicted RBP7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 VHLLQ6RSH7 139 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 TP53INP2Q8IXH6 220 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 C7orf61Q8IZ16 206 aa7.17□□□□□ -1.26
SMCHD1-204ENST00000581226 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 ANGEL2Q5VTE6 544 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 DCAF15Q66K64 600 aa7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 TSPYL5Q86VY4 417 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 ENOX1Q8TC92 643 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 HNRNPLLQ8WVV9 542 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 PAK6Q9NQU5 681 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-204ENST00000581226 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 KIAA1211LQ6NV74 962 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 WFDC3Q8IUB2 231 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 CREG2Q8IUH2 290 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 SREK1Q8WXA9 508 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 KLHL6Q8WZ60 621 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 DHX38Q92620 1227 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 GFOD1Q9NXC2 390 aa7.15□□□□□ -1.26
SMCHD1-204ENST00000581226 SHOXO15266 292 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 SIGLEC6O43699 453 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 PRAMEF1O95521 474 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 GP2P55259 537 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 ZP2Q05996 745 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 TCEAL1Q15170 157 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 FXNQ16595 210 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 NOL9Q5SY16 702 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 CKAP2LQ8IYA6 745 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 AGBL5Q8NDL9 886 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 HAUS7Q99871 368 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 CHST7Q9NS84 486 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 DUSP13Q9UII6 198 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 ZNF451Q9Y4E5 1061 aa7.14□□□□□ -1.27
SMCHD1-204ENST00000581226 MEIS1O00470 390 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 CD247P20963 164 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 NCAPHQ15003 741 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 PLCL1Q15111 1095 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 GAB4Q2WGN9 574 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 HEATR6Q6AI08 1181 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 C6orf15Q6UXA7 325 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 FAM178BQ8IXR5 827 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 HDAC8Q9BY41 377 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 CARS2Q9HA77 564 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 GP6Q9HCN6 339 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 LMCD1Q9NZU5 365 aa7.13□□□□□ -1.27
SMCHD1-204ENST00000581226 CBFA2T2O43439 604 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 KLF4O43474 513 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 DDAH1O94760 285 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 ESR1P03372 595 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 FUT4P22083 530 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 LTKP29376 864 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 ADAT2Q7Z6V5 191 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 ARMC5Q96C12 935 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 TCTN2Q96GX1 697 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 DSCC1Q9BVC3 393 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 HIRIP3Q9BW71 556 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 TRIM55Q9BYV6 548 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 ST7Q9NRC1 585 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 PRR13Q9NZ81 148 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
SMCHD1-204ENST00000581226 B2RBV5 119 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 EPHX1P07099 455 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 ITGA4P13612 1032 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 ZNF445P59923 1031 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 EGR3Q06889 387 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 CELF2-AS1Q8N7Q2 184 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 BRF1Q92994 677 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 FGD4Q96M96 766 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 PRDM7Q9NQW5 492 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 PCDHA11Q9Y5I1 949 aa7.11□□□□□ -1.27
SMCHD1-204ENST00000581226 SSU72P8A0A1W2PR75 194 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 RAB33AQ14088 237 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 SLC23A3Q6PIS1 610 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 ABI1Q8IZP0 508 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 KLHL25Q9H0H3 589 aa7.1□□□□□ -1.27
SMCHD1-204ENST00000581226 WHRNQ9P202 907 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms