RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 WDR18Q9BV38 432 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 ASCC2Q9H1I8 757 aaPredicted RBP4.14□□□□□ -1.75
CDH19-204ENST00000579658 PRDM12Q9H4Q4 367 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 TMOD4Q9NZQ9 345 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 LMCD1Q9NZU5 365 aa4.14□□□□□ -1.75
CDH19-204ENST00000579658 DCDC2CA8MYV0 355 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 SRGAP3O43295 1099 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 GNAI2P04899 355 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 GNAI3P08754 354 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ITGB8P26012 769 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 RFC5P40937 340 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ATP8B2P98198 1209 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ATP2B2Q01814 1243 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 CEP85Q6P2H3 762 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 CCDC129Q6ZRS4 1044 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ANKRD33Q7Z3H0 272 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 GPR142Q7Z601 462 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TMEM199Q8N511 208 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ZGPATQ8N5A5 531 aaKnown RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 EDC3Q96F86 508 aaKnown RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 FAM84BQ96KN1 310 aaPredicted RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 SLC28A3Q9HAS3 691 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 CNNM1Q9NRU3 951 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ZBTB40Q9NUA8 1239 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 RABGAP1Q9Y3P9 1069 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 PCDHA11Q9Y5I1 949 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 RFX7Q2KHR2 1363 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 SALL1Q9NSC2 1324 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TRIM43BA6NCK2 446 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 USP17L5A8MUK1 530 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 SEPT4O43236 478 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 FRAT2O75474 233 aaPredicted RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 SEC24BO95487 1268 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TIMP1P01033 207 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 IGFBP4P22692 258 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 ATN1P54259 1190 aaPredicted RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 MYSM1Q5VVJ2 828 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 MFSD5Q6N075 450 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 PPM1EQ8WY54 764 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 HLA-CQ95604 372 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TRIM43Q96BQ3 446 aaPredicted RBP4.13□□□□□ -1.75
CDH19-204ENST00000579658 PBX4Q9BYU1 374 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 C11orf16Q9NQ32 467 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 FAM50BQ9Y247 325 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 PCDHB15Q9Y5E8 787 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TTC28Q96AY4 2481 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 SZT2Q5T011 3432 aa4.13□□□□□ -1.75
CDH19-204ENST00000579658 TRIM75PA6NK02 468 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 SPDYE16A6NNV3 312 aaPredicted RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 EYA2O00167 538 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TLR3O15455 904 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 IGHA2P01877 340 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 CYBAP13498 195 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 HERVK_113P62684 666 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 ERVK-9P63128 1117 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 ERVK-24P63145 666 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 HIC1Q14526 733 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TREML2Q5T2D2 321 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 CDC42EP5Q6NZY7 148 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 LBX2Q6XYB7 198 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 RNF180Q86T96 592 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TICAM2Q86XR7 235 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 VGLL2Q8N8G2 317 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PBXIP1Q96AQ6 731 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 UPF3BQ9BZI7 483 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 GPHNQ9NQX3 736 aaPredicted RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 TMEM39AQ9NV64 488 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 HERC5Q9UII4 1024 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 DDX19BQ9UMR2 479 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 IQSEC3Q9UPP2 1182 aaPredicted RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 JAG2Q9Y219 1238 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 COL6A3P12111 3177 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PDS5AQ29RF7 1337 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 GBF1Q92538 1859 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 RBM47A0AV96 593 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 STRNO43815 780 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PFKMP08237 780 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PTPREP23469 700 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 SSTR3P32745 418 aaPredicted RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 CACNB3P54284 484 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TIMM10P62072 90 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 RBM10P98175 930 aaKnown RBP4.12□□□□□ -1.75
CDH19-204ENST00000579658 TLE2Q04725 743 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 TFCP2Q12800 502 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 MTX1Q13505 466 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 ADGRE1Q14246 886 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 METTL24Q5JXM2 366 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 SLC44A5Q8NCS7 719 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 SSH3Q8TE77 659 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 NUP133Q8WUM0 1156 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PRKAG3Q9UGI9 489 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 EXOC6BQ9Y2D4 811 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 DAGLAQ9Y4D2 1042 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 PIEZO1Q92508 2521 aa4.12□□□□□ -1.75
CDH19-204ENST00000579658 MOXD2PA6NHM9 499 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 SMARCA5O60264 1052 aaPredicted RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 CNGA1P29973 690 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 ADORA1P30542 326 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 GYG1P46976 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms