RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDC42EP4-204ENST00000579611 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
CDC42EP4-204ENST00000579611 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 PRKAR2AP13861 404 aaKnown RBP20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 VPS53Q5VIR6 699 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 PLXNB2O15031 1838 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 ZMYM6O95789 1325 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 CEP290O15078 2479 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 RLFQ13129 1914 aa20.17■□□□□ 0.82
CDC42EP4-204ENST00000579611 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 TTLL1O95922 423 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 NDUFB10O96000 172 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 TFRCP02786 760 aaKnown RBP20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 TSPY3P0CV98 308 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 TSPY8P0CW00 308 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 ERCC3P19447 782 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 TMEM132BQ14DG7 1078 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 CCL14Q16627 93 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 GMCL1P1Q8NEA9 526 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 FBXO28Q9NVF7 368 aa20.16■□□□□ 0.82
CDC42EP4-204ENST00000579611 MYH8P13535 1937 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 VWA5AO00534 786 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 SLC25A27O95847 323 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 FGAP02671 866 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 TFAP4Q01664 338 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 NMIQ13287 307 aaPredicted RBP20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 WDR78Q5VTH9 848 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 REPS2Q8NFH8 660 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 OGDHLQ9ULD0 1010 aa20.15■□□□□ 0.82
CDC42EP4-204ENST00000579611 A0A0G2JMZ2 1700 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 ORC4O43929 436 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 HSPD1P10809 573 aaKnown RBP20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 SDSP20132 328 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 NOVP48745 357 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 RIOX2Q8IUF8 465 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 HTATIP2Q9BUP3 242 aa20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 ZNF214Q9UL59 606 aaPredicted RBP20.14■□□□□ 0.81
CDC42EP4-204ENST00000579611 CCDC171Q6TFL3 1326 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 ADORA2AP29274 412 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 COPB2P35606 906 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 FAM47AQ5JRC9 791 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 MFSD14CQ5VZR4 134 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 OLFML2BQ68BL8 750 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 PRPF38AQ8NAV1 312 aaKnown RBP20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 FLRT1Q9NZU1 646 aa20.13■□□□□ 0.81
CDC42EP4-204ENST00000579611 ATP2A1O14983 1001 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 STAT3P40763 770 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 CTDSPL2Q05D32 466 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 PLS1Q14651 629 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 NPLOC4Q8TAT6 608 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 SLC5A4Q9NY91 659 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 TACC3Q9Y6A5 838 aa20.12■□□□□ 0.81
CDC42EP4-204ENST00000579611 HIP1O00291 1037 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 PCP11498 1178 aaKnown RBP20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 LHX8Q68G74 356 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 DPP9Q86TI2 863 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 NCAPG2Q86XI2 1143 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 GMCL1Q96IK5 515 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 IL17RBQ9NRM6 502 aa20.11■□□□□ 0.81
CDC42EP4-204ENST00000579611 RAD21O60216 631 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 COBLO75128 1261 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 FCER1AP12319 257 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 MNX1P50219 401 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 TEX13BQ9BXU2 312 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 INCENPQ9NQS7 918 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
CDC42EP4-204ENST00000579611 TSPY2A6NKD2 308 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 FDX1P10109 184 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 BMP3P12645 472 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 CCND3P30281 292 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 NT5C2P49902 561 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 SLFN13Q68D06 897 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 NECAB2Q7Z6G3 386 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 LRRC47Q8N1G4 583 aaKnown RBP20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 PAWRQ96IZ0 340 aaKnown RBP20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 SLC38A10Q9HBR0 1119 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 TCP11L1Q9NUJ3 509 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 DIS3Q9Y2L1 958 aaKnown RBP20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 ZNF236Q9UL36 1845 aa20.09■□□□□ 0.81
CDC42EP4-204ENST00000579611 MSCO60682 206 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 PLA2G6O60733 806 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 PDE4AP27815 886 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 OAZ1P54368 228 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 DPF3Q92784 378 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 NBPF3Q9H094 633 aa20.08■□□□□ 0.81
CDC42EP4-204ENST00000579611 RANBP6O60518 1105 aaKnown RBP20.07■□□□□ 0.8
CDC42EP4-204ENST00000579611 ZBED4O75132 1171 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms