RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 RCSD1Q6JBY9 416 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 ZSCAN10Q96SZ4 725 aaPredicted RBP11.81□□□□□ -0.52
MKS1-208ENST00000579358 TMEM47Q9BQJ4 181 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 ADAMTS5Q9UNA0 930 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 TNKSO95271 1327 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
MKS1-208ENST00000579358 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
MKS1-208ENST00000579358 BMP3P12645 472 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 MAPK4P31152 587 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 CCNA1P78396 465 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 DCAF4Q8WV16 495 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
MKS1-208ENST00000579358 SLF1Q9BQI6 1058 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 UBAC1Q9BSL1 405 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 MTA3Q9BTC8 594 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 SRRDQ9UH36 339 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 PTPN22Q9Y2R2 807 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 TAF6LQ9Y6J9 622 aa11.8□□□□□ -0.52
MKS1-208ENST00000579358 PLA2G6O60733 806 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 FDX1P10109 184 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 STAT2P52630 851 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 Q3C1V9 767 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 MB21D2Q8IYB1 491 aaPredicted RBP11.79□□□□□ -0.52
MKS1-208ENST00000579358 PIAS4Q8N2W9 510 aaPredicted RBP11.79□□□□□ -0.52
MKS1-208ENST00000579358 ENAHQ8N8S7 591 aaPredicted RBP11.79□□□□□ -0.52
MKS1-208ENST00000579358 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
MKS1-208ENST00000579358 COA7Q96BR5 231 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 ZKSCAN3Q9BRR0 538 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
MKS1-208ENST00000579358 A0A0G2JMZ2 1700 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 ERICH2A1L162 156 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 TMEM232C9JQI7 657 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 VWA5AO00534 786 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 PDHBP11177 359 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 ZKSCAN1P17029 563 aaPredicted RBP11.78□□□□□ -0.52
MKS1-208ENST00000579358 MCCP23508 829 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 SART3Q15020 963 aaKnown RBP11.78□□□□□ -0.52
MKS1-208ENST00000579358 SEC23AQ15436 765 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 PNMA1Q8ND90 353 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 SHCBP1Q8NEM2 672 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 REPS2Q8NFH8 660 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 SOCS4Q8WXH5 440 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 SPATC1LQ9H0A9 340 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 KAT14Q9H8E8 782 aa11.78□□□□□ -0.52
MKS1-208ENST00000579358 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 PEX10O60683 326 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 HSPA4P34932 840 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 COPB2P35606 906 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 OAZ1P54368 228 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 PRKCZQ05513 592 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 IRF5Q13568 498 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 KRT32Q14532 448 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 CCDC96Q2M329 555 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 IFIT1BQ5T764 474 aaKnown RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 BTNL9Q6UXG8 535 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 GPR142Q7Z601 462 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 KCNB2Q92953 911 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 KIFC2Q96AC6 838 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 ABHD8Q96I13 439 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 PORCNQ9H237 461 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
MKS1-208ENST00000579358 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
MKS1-208ENST00000579358 IFIT3O14879 490 aaKnown RBP11.76□□□□□ -0.53
MKS1-208ENST00000579358 ZBED4O75132 1171 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
MKS1-208ENST00000579358 SLC25A27O95847 323 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 MCM5P33992 734 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 FLT3LGP49771 235 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 ANTXR2P58335 489 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
MKS1-208ENST00000579358 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
MKS1-208ENST00000579358 KCTD1Q719H9 257 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms