RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ASIC4Q96FT7 647 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 CDC5LQ99459 802 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 PTPRFP10586 1907 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 KDM2BQ8NHM5 1336 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
SMARCE1-215ENST00000578995 FZD9O00144 591 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 NPHP1O15259 732 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 GRIN3BO60391 1043 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 TAF5LO75529 589 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 PDE8BO95263 885 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 IGHDP01880 384 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 IARSP41252 1262 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 AFF1P51825 1210 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 IRX6P78412 446 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 SPEM2Q0P670 501 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 HDAC1Q13547 482 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 AOC3Q16853 763 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 CCDC57Q2TAC2 916 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 SOGA3Q5TF21 947 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 LDHAL6AQ6ZMR3 332 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 FBXO11Q86XK2 927 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 DTX1Q86Y01 620 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 RTKN2Q8IZC4 609 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 TAOK3Q9H2K8 898 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 DCTPP1Q9H773 170 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 ZNF277Q9NRM2 450 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 MROH5Q6ZUA9 1318 aa4.71□□□□□ -1.66
SMARCE1-215ENST00000578995 GREB1LQ9C091 1923 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 IL1R1P14778 569 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 LMNB1P20700 586 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 ATP2B4P23634 1241 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 ADORA1P30542 326 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 IGHMBP2P38935 993 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 IL15P40933 162 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 TFCP2Q12800 502 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 USP4Q13107 963 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 AAMPQ13685 434 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 UBE4AQ14139 1066 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 GPR162Q16538 588 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 C9orf131Q5VYM1 1079 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 DPP8Q6V1X1 898 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 SPOCD1Q6ZMY3 1216 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 ARHGAP27Q6ZUM4 889 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 FBXO33Q7Z6M2 555 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 SMC5Q8IY18 1101 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 NUDT8Q8WV74 236 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 EAF2Q96CJ1 260 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 GMLQ99445 158 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 ANKRD2Q9GZV1 360 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 SIL1Q9H173 461 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 VPS33BQ9H267 617 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 GPR108Q9NPR9 543 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 KCNQ5Q9NR82 932 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 TLR7Q9NYK1 1049 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 DBNLQ9UJU6 430 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 EXOC6BQ9Y2D4 811 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 LEMD3Q9Y2U8 911 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 CHMP3Q9Y3E7 222 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 FAM205AQ6ZU69 1335 aa4.7□□□□□ -1.66
SMARCE1-215ENST00000578995 THSD7BQ9C0I4 1608 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 A0A1B0GUL7 405 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 UFL1O94874 794 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 CXCL9Q07325 125 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 SFSWAPQ12872 951 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 PUM3Q15397 648 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 SKIV2LQ15477 1246 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 GRIK5Q16478 980 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 TNNI3KQ59H18 835 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 DACT2Q5SW24 774 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 CERS5Q8N5B7 392 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 TDRD7Q8NHU6 1098 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 RHPN1Q8TCX5 695 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 MPHOSPH8Q99549 860 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 NEUROD4Q9HD90 331 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 CNNM1Q9NRU3 951 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 RNF181Q9P0P0 153 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 HDAC5Q9UQL6 1122 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 RAXQ9Y2V3 346 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 FPGT-TNNI3KV9GXZ4 949 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 PARP14Q460N5 1801 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 PDS5AQ29RF7 1337 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 DOCK1Q14185 1865 aa4.69□□□□□ -1.66
SMARCE1-215ENST00000578995 RFX7Q2KHR2 1363 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SHTN1A0MZ66 631 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 PPIP5K2O43314 1243 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SMARCA5O60264 1052 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ECE2O60344 883 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SURF6O75683 361 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 STAU1O95793 577 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 INHAP05111 366 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 ARID4AP29374 1257 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 PHKA1P46020 1223 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 GYG1P46976 350 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SCNN1DP51172 638 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 SMTNP53814 917 aa4.68□□□□□ -1.66
SMARCE1-215ENST00000578995 TIMM10P62072 90 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms