RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 FEM1BQ9UK73 627 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-208ENST00000578630 TNKSO95271 1327 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
ERBB2-208ENST00000578630 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 FDX1P10109 184 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 PSMC4P43686 418 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 FCGRTP55899 365 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 LACTBP83111 547 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 IKQ13123 557 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 WTAPQ15007 396 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 PKN2Q16513 984 aaKnown RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 CTU1Q7Z7A3 348 aaKnown RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 FAM160B2Q86V87 743 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-208ENST00000578630 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 EFCC1Q9HA90 598 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
ERBB2-208ENST00000578630 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-208ENST00000578630 TMEM232C9JQI7 657 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 PLA2G6O60733 806 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 ZBED4O75132 1171 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 PSMA5P28066 241 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 TMEM67Q5HYA8 995 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
ERBB2-208ENST00000578630 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-208ENST00000578630 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 KCNB2Q92953 911 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 TRIM17Q9Y577 477 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 PTPRFP10586 1907 aa13.51□□□□□ -0.25
ERBB2-208ENST00000578630 PRC1O43663 620 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 STAT2P52630 851 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 ERVK-9P63128 1117 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 ERVK-24P63145 666 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 SEC23AQ15436 765 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 Q3C1V9 767 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
ERBB2-208ENST00000578630 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 IGDCC4Q8TDY8 1250 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 KIFC2Q96AC6 838 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 COA7Q96BR5 231 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
ERBB2-208ENST00000578630 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
ERBB2-208ENST00000578630 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 VWA5AO00534 786 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 TNPO2O14787 897 aaKnown RBP13.49□□□□□ -0.25
ERBB2-208ENST00000578630 PDHBP11177 359 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 MAPK4P31152 587 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 PRMT2P55345 433 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 PLS1Q14651 629 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 ATG4CQ96DT6 458 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 SNX14Q9Y5W7 946 aa13.49□□□□□ -0.25
ERBB2-208ENST00000578630 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 ECM2O94769 699 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 SLC25A27O95847 323 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 STAT3P40763 770 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 LIFRP42702 1097 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 FGD1P98174 961 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 ZNF543Q08ER8 600 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 COL13A1Q5TAT6 717 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 SPATC1LQ9H0A9 340 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 BTBD7Q9P203 1132 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-208ENST00000578630 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
ERBB2-208ENST00000578630 CNMDO75829 334 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 COPB2P35606 906 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 ANTXR2P58335 489 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 TMEM132BQ14DG7 1078 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
ERBB2-208ENST00000578630 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms