RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 DEPDC7Q96QD5 511 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 USP21Q9UK80 565 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 UBR1Q8IWV7 1749 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 ANKRD30AQ9BXX3 1397 aa7.68□□□□□ -1.18
PTPRM-208ENST00000578600 MAST1Q9Y2H9 1570 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 TET3O43151 1660 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 PHLPP1O60346 1717 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 NEFMP07197 916 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 LRP10Q7Z4F1 713 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 JAZF1Q86VZ6 243 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 TAB3Q8N5C8 712 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 C2CD4AQ8NCU7 369 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 ACSF2Q96CM8 615 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 ATXN3LQ9H3M9 355 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 RRP7BPQ9NSQ0 103 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 SNTG2Q9NY99 539 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 GMIPQ9P107 970 aa7.67□□□□□ -1.18
PTPRM-208ENST00000578600 RPRD2Q5VT52 1461 aaKnown RBP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 AHDC1Q5TGY3 1603 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-208ENST00000578600 STRCP1A6NGW2 1772 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 PPM1GO15355 546 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-208ENST00000578600 ALX3O95076 343 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 PGRP06401 933 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 CDCP2Q5VXM1 449 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 ANKRD34AQ69YU3 496 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 OVOS1Q6IE37 1185 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 RUFY4Q6ZNE9 571 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 C19orf47Q8N9M1 422 aaKnown RBP7.66□□□□□ -1.18
PTPRM-208ENST00000578600 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 TM9SF2Q99805 663 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 TNKS2Q9H2K2 1166 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 AKTIPQ9H8T0 292 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 TJP2Q9UDY2 1190 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 MRPL42Q9Y6G3 142 aaKnown RBP7.66□□□□□ -1.18
PTPRM-208ENST00000578600 NWD1Q149M9 1564 aa7.66□□□□□ -1.18
PTPRM-208ENST00000578600 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 ETF1P62495 437 aaKnown RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 INSM1Q01101 510 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 TTLL4Q14679 1199 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 FXNQ16595 210 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 LARP1BQ659C4 914 aaKnown RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 MCATQ8IVS2 390 aaKnown RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 C12orf50Q8NA57 414 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 MROH1Q8NDA8 1641 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 ZNF507Q8TCN5 953 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-208ENST00000578600 LRRIQ1Q96JM4 1722 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 CNNM2Q9H8M5 875 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 FBRSQ9HAH7 460 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 ST7Q9NRC1 585 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 AP4E1Q9UPM8 1137 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 ACTL7BQ9Y614 415 aa7.65□□□□□ -1.18
PTPRM-208ENST00000578600 LRP6O75581 1613 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 COL16A1Q07092 1604 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-208ENST00000578600 LMTK2Q8IWU2 1503 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 NOS1P29475 1434 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 PTCH1Q13635 1447 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 A0A1W2PQH9 124 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 CHURC1-FNTBB4DL54 471 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 C9orf172C9J069 976 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 ACRP10323 421 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 NME1P15531 152 aaKnown RBP7.64□□□□□ -1.19
PTPRM-208ENST00000578600 GUCY2CP25092 1073 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 CAP2P40123 477 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 IFRD2Q12894 506 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-208ENST00000578600 DDR2Q16832 855 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 INTS3Q68E01 1043 aaKnown RBP7.64□□□□□ -1.19
PTPRM-208ENST00000578600 FDX2Q6P4F2 183 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 DYMQ7RTS9 669 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 UBE3DQ7Z6J8 389 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 HID1Q8IV36 788 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 MRPL41Q8IXM3 137 aaKnown RBP7.64□□□□□ -1.19
PTPRM-208ENST00000578600 NLGN1Q8N2Q7 840 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 CELF2-AS1Q8N7Q2 184 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 TMEM87BQ96K49 555 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 FAM105AQ9NUU6 356 aa7.64□□□□□ -1.19
PTPRM-208ENST00000578600 RGS12O14924 1447 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 RIMS2Q9UQ26 1411 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 UPK3BL1B0FP48 263 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 UPK3BL2E5RIL1 263 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 TNFRSF10CO14798 259 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 NOS3P29474 1203 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 PREPP48147 710 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 NRG1Q02297 640 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-208ENST00000578600 ADGRE1Q14246 886 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRM-208ENST00000578600 RASA3Q14644 834 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 ZNF662Q6ZS27 426 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 NLRC3Q7RTR2 1065 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 WFDC12Q8WWY7 111 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 ISL2Q96A47 359 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 CCDC113Q9H0I3 377 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 PICK1Q9NRD5 415 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRM-208ENST00000578600 MSRB2Q9Y3D2 182 aa7.63□□□□□ -1.19
PTPRM-208ENST00000578600 BLMP54132 1417 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-208ENST00000578600 LRPPRCP42704 1394 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms