RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 TPCN1Q9ULQ1 816 aa12.45□□□□□ -0.42
USP22-208ENST00000578446 LIMCH1Q9UPQ0 1083 aa12.45□□□□□ -0.42
USP22-208ENST00000578446 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 BMP3P12645 472 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 PDIA3P30101 505 aaKnown RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 EVCP57679 992 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 STK3Q13188 491 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 GRM4Q14833 912 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 RTN1Q16799 776 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 ASPRV1Q53RT3 343 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 KCTD1Q719H9 257 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 ZNF274Q96GC6 653 aaPredicted RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
USP22-208ENST00000578446 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
USP22-208ENST00000578446 CCDC196A0A1B0GTZ2 297 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
USP22-208ENST00000578446 GOLGA8HP0CJ92 632 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 SNHG28P0DPA3 235 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 ZNF543Q08ER8 600 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP22-208ENST00000578446 TREML2Q5T2D2 321 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
USP22-208ENST00000578446 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
USP22-208ENST00000578446 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
USP22-208ENST00000578446 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 BTBD19C9JJ37 291 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 TMEM232C9JQI7 657 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 DHX16O60231 1041 aaKnown RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 AOC2O75106 756 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 FLOT1O75955 427 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 GNAQP50148 359 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 STAT2P52630 851 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 CCT2P78371 535 aaKnown RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 MOGSQ13724 837 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
USP22-208ENST00000578446 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 NID2Q14112 1375 aa12.42□□□□□ -0.42
USP22-208ENST00000578446 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
USP22-208ENST00000578446 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 PDHXO00330 501 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 CPLX1O14810 134 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 PFKFB2O60825 505 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 LARGE1O95461 756 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 OSBPP22059 807 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 VEGFBP49765 207 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 INHBEP58166 350 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 ME3Q16798 604 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 GPAT2Q6NUI2 795 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 CPLX2Q6PUV4 134 aaKnown RBP12.41□□□□□ -0.42
USP22-208ENST00000578446 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 STAG2Q8N3U4 1231 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 LOC285556D6RIA3 1793 aa12.41□□□□□ -0.42
USP22-208ENST00000578446 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 HOXA7P31268 230 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 SLC16A2P36021 539 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 CATSPERGQ6ZRH7 1159 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 TMTC3Q6ZXV5 915 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 NECAB1Q8N987 351 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
USP22-208ENST00000578446 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
USP22-208ENST00000578446 SNX21Q969T3 373 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms