RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.31■■□□□ 1.96
VAPA-205ENST00000578314 PLIN4Q96Q06 1357 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 GREB1LQ9C091 1923 aaPredicted RBP27.31■■□□□ 1.96
VAPA-205ENST00000578314 TSPY3P0CV98 308 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 TSPY8P0CW00 308 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 ZKSCAN1P17029 563 aaPredicted RBP27.3■■□□□ 1.96
VAPA-205ENST00000578314 SDSP20132 328 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 TFAP4Q01664 338 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 FAM83BQ5T0W9 1011 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 HMX1Q9NP08 348 aaPredicted RBP27.3■■□□□ 1.96
VAPA-205ENST00000578314 PPP1R9AQ9ULJ8 1098 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 IVNS1ABPQ9Y6Y0 642 aa27.3■■□□□ 1.96
VAPA-205ENST00000578314 STRNO43815 780 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 RAD21O60216 631 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 TTLL1O95922 423 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 NDUFB10O96000 172 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 HOXC6P09630 235 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 IRX6P78412 446 aaPredicted RBP27.29■■□□□ 1.96
VAPA-205ENST00000578314 FAM47AQ5JRC9 791 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 FBXO28Q9NVF7 368 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 RLFQ13129 1914 aa27.29■■□□□ 1.96
VAPA-205ENST00000578314 FGAP02671 866 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 TFRCP02786 760 aaKnown RBP27.28■■□□□ 1.96
VAPA-205ENST00000578314 FGRP09769 529 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 HSPD1P10809 573 aaKnown RBP27.28■■□□□ 1.96
VAPA-205ENST00000578314 ERCC3P19447 782 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 CTDSPL2Q05D32 466 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 TMEM132BQ14DG7 1078 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 CCL14Q16627 93 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 ZNF589Q86UQ0 364 aaPredicted RBP27.28■■□□□ 1.96
VAPA-205ENST00000578314 MROH8Q9H579 483 aa27.28■■□□□ 1.96
VAPA-205ENST00000578314 VWA5AO00534 786 aa27.27■■□□□ 1.96
VAPA-205ENST00000578314 PRKAR2AP13861 404 aaKnown RBP27.27■■□□□ 1.96
VAPA-205ENST00000578314 INCENPQ9NQS7 918 aa27.27■■□□□ 1.96
VAPA-205ENST00000578314 TACC3Q9Y6A5 838 aa27.27■■□□□ 1.96
VAPA-205ENST00000578314 ZMYM6O95789 1325 aa27.26■■□□□ 1.95
VAPA-205ENST00000578314 CCDC171Q6TFL3 1326 aa27.26■■□□□ 1.95
VAPA-205ENST00000578314 CACNB2Q08289 660 aaPredicted RBP27.26■■□□□ 1.95
VAPA-205ENST00000578314 PLS1Q14651 629 aa27.26■■□□□ 1.95
VAPA-205ENST00000578314 SAMD1Q6SPF0 538 aaPredicted RBP27.26■■□□□ 1.95
VAPA-205ENST00000578314 GMCL1P1Q8NEA9 526 aa27.26■■□□□ 1.95
VAPA-205ENST00000578314 NUP88Q99567 741 aaPredicted RBP27.26■■□□□ 1.95
VAPA-205ENST00000578314 ORC4O43929 436 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 SLC25A27O95847 323 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 HABP4Q5JVS0 413 aaKnown RBP27.25■■□□□ 1.95
VAPA-205ENST00000578314 PPP4R3BQ5MIZ7 849 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 ABRAQ8N0Z2 381 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 REPS2Q8NFH8 660 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 SLF1Q9BQI6 1058 aa27.25■■□□□ 1.95
VAPA-205ENST00000578314 A0A0G2JMZ2 1700 aa27.24■■□□□ 1.95
VAPA-205ENST00000578314 FARP2O94887 1054 aaPredicted RBP27.24■■□□□ 1.95
VAPA-205ENST00000578314 IGHA2P01877 340 aa27.24■■□□□ 1.95
VAPA-205ENST00000578314 MFAP1P55081 439 aaKnown RBP27.24■■□□□ 1.95
VAPA-205ENST00000578314 NPLOC4Q8TAT6 608 aa27.24■■□□□ 1.95
VAPA-205ENST00000578314 FLRT1Q9NZU1 646 aa27.24■■□□□ 1.95
VAPA-205ENST00000578314 HIP1O00291 1037 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 PDE4AP27815 886 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 ADORA2AP29274 412 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 STAT3P40763 770 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 NCAPG2Q86XI2 1143 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 RIOX2Q8IUF8 465 aa27.23■■□□□ 1.95
VAPA-205ENST00000578314 LRRC47Q8N1G4 583 aaKnown RBP27.23■■□□□ 1.95
VAPA-205ENST00000578314 PRPF38AQ8NAV1 312 aaKnown RBP27.23■■□□□ 1.95
VAPA-205ENST00000578314 ZNF214Q9UL59 606 aaPredicted RBP27.23■■□□□ 1.95
VAPA-205ENST00000578314 TSPY2A6NKD2 308 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 H0YGN5 161 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 NOVP48745 357 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 MFSD14CQ5VZR4 134 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 DPP9Q86TI2 863 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 ANKLE1Q8NAG6 615 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 DPF3Q92784 378 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 HTATIP2Q9BUP3 242 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 IL17RBQ9NRM6 502 aa27.22■■□□□ 1.95
VAPA-205ENST00000578314 CEP290O15078 2479 aa27.21■■□□□ 1.95
VAPA-205ENST00000578314 SLFN13Q68D06 897 aa27.21■■□□□ 1.95
VAPA-205ENST00000578314 DIAPH3Q9NSV4 1193 aa27.21■■□□□ 1.95
VAPA-205ENST00000578314 OGDHLQ9ULD0 1010 aa27.21■■□□□ 1.95
VAPA-205ENST00000578314 RANBP6O60518 1105 aaKnown RBP27.2■■□□□ 1.94
VAPA-205ENST00000578314 COBLO75128 1261 aa27.2■■□□□ 1.94
VAPA-205ENST00000578314 COPB2P35606 906 aa27.2■■□□□ 1.94
VAPA-205ENST00000578314 CWC27Q6UX04 472 aaKnown RBP27.2■■□□□ 1.94
VAPA-205ENST00000578314 SLC5A4Q9NY91 659 aa27.2■■□□□ 1.94
VAPA-205ENST00000578314 FEM1BQ9UK73 627 aa27.2■■□□□ 1.94
VAPA-205ENST00000578314 FCER1AP12319 257 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 BMP3P12645 472 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 CCND3P30281 292 aaPredicted RBP27.19■■□□□ 1.94
VAPA-205ENST00000578314 OLFML2BQ68BL8 750 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 LHX8Q68G74 356 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 GMCL1Q96IK5 515 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 STX8Q9UNK0 236 aa27.19■■□□□ 1.94
VAPA-205ENST00000578314 ATP2A1O14983 1001 aa27.18■■□□□ 1.94
VAPA-205ENST00000578314 NMT2O60551 498 aa27.18■■□□□ 1.94
VAPA-205ENST00000578314 TEX13BQ9BXU2 312 aa27.18■■□□□ 1.94
VAPA-205ENST00000578314 PCP11498 1178 aaKnown RBP27.17■■□□□ 1.94
VAPA-205ENST00000578314 MNX1P50219 401 aaPredicted RBP27.17■■□□□ 1.94
VAPA-205ENST00000578314 TTC22Q5TAA0 569 aa27.17■■□□□ 1.94
VAPA-205ENST00000578314 PAWRQ96IZ0 340 aaKnown RBP27.17■■□□□ 1.94
VAPA-205ENST00000578314 NBPF3Q9H094 633 aa27.17■■□□□ 1.94
VAPA-205ENST00000578314 SLC38A10Q9HBR0 1119 aa27.17■■□□□ 1.94
VAPA-205ENST00000578314 TCP11L1Q9NUJ3 509 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms