RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 KCTD2Q14681 263 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 SIAH1Q8IUQ4 282 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 ZNFX1Q9P2E3 1918 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 MBD4O95243 580 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 AKR1A1P14550 325 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 AKR1B1P15121 316 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 CCDC174Q6PII3 467 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 TINF2Q9BSI4 451 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 COL11A1P12107 1806 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 MROH7Q68CQ1 1323 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 MOXD2PA6NHM9 499 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 CST5P28325 142 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 OAZ1P54368 228 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 REPS2Q8NFH8 660 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 STAT3P40763 770 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 NKX3-2P78367 333 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 GJC2Q5T442 439 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
SMARCE1-214ENST00000578112 VWA5AO00534 786 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 ZFYP08048 801 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 GNAT2P19087 354 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 Q7L0L9 218 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-214ENST00000578112 CLTBP09497 229 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 PLS1Q14651 629 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 TEX13BQ9BXU2 312 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 CEP290O15078 2479 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 CYP2D6P10635 497 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 SLC4A4Q9Y6R1 1079 aa13.47□□□□□ -0.25
SMARCE1-214ENST00000578112 USP17L12C9JPN9 530 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 USP17L21D6R901 530 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 ZNF865P0CJ78 1059 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 ADCYAP1R1P41586 468 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 PANK1Q8TE04 598 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 MKL1Q969V6 931 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 DYNLL2Q96FJ2 89 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 GPATCH3Q96I76 525 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 ELP1O95163 1332 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 SLC44A5Q8NCS7 719 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 CHST13Q8NET6 341 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 LRRCC1Q9C099 1032 aa13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-214ENST00000578112 DNAJC25-GNG10A0A024R161 153 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 TKFCQ3LXA3 575 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 SEMA6BQ9H3T3 888 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 IGKV6D-41A0A0C4DH26 115 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 ZBED4O75132 1171 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 DUSP11O75319 330 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 SHHQ15465 462 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 BADQ92934 168 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 BOLA2Q9H3K6 86 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 FEM1BQ9UK73 627 aa13.45□□□□□ -0.26
SMARCE1-214ENST00000578112 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 PRKAB2O43741 272 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 APPBP2Q92624 585 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 TRIM43BA6NCK2 446 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 PLA2G6O60733 806 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 TLE2Q04725 743 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms