RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SNRKQ9NRH2 765 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 HCN4Q9Y3Q4 1203 aa16.57■□□□□ 0.24
SREBF1-217ENST00000577897 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 SNX17Q15036 470 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-217ENST00000577897 TIFAQ96CG3 184 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 XAGE2Q96GT9 111 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 ZNF512BQ96KM6 892 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-217ENST00000577897 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.56■□□□□ 0.244e-7■■■□□ 15.4
SREBF1-217ENST00000577897 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
SREBF1-217ENST00000577897 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 HMG20BQ9P0W2 317 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
SREBF1-217ENST00000577897 PDS5AQ29RF7 1337 aaKnown RBP16.55■□□□□ 0.24
SREBF1-217ENST00000577897 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-217ENST00000577897 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-217ENST00000577897 LDHCP07864 332 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 RAG1P15918 1043 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 NEK4P51957 841 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 GSTO1P78417 241 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 TLE2Q04725 743 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-217ENST00000577897 KRT32Q14532 448 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-217ENST00000577897 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L2Q6R6M4 530 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 FEZ1Q99689 392 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 RAI14Q9P0K7 980 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
SREBF1-217ENST00000577897 CLTBP09497 229 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 HOXC6P09630 235 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 MRPS5P82675 430 aaKnown RBP16.54■□□□□ 0.24
SREBF1-217ENST00000577897 FPGSQ05932 587 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 GRB14Q14449 540 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 SH3RF3Q8TEJ3 882 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-217ENST00000577897 NSUN4Q96CB9 384 aaKnown RBP16.54■□□□□ 0.24
SREBF1-217ENST00000577897 PRDM12Q9H4Q4 367 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 XIRP2A4UGR9 3374 aa16.54■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 PTMSP20962 102 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
SREBF1-217ENST00000577897 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
SREBF1-217ENST00000577897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-217ENST00000577897 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-217ENST00000577897 REV3LO60673 3130 aa16.53■□□□□ 0.24
SREBF1-217ENST00000577897 TCF20Q9UGU0 1960 aaKnown RBP16.53■□□□□ 0.24
SREBF1-217ENST00000577897 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 GOLIM4O00461 696 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 SEPT4O43236 478 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 PQBP1O60828 265 aaKnown RBP16.52■□□□□ 0.24
SREBF1-217ENST00000577897 NBR1Q14596 966 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 LRRC41Q15345 812 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 CCDC129Q6ZRS4 1044 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 MAPKAPK5Q8IW41 473 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 MAP4K1Q92918 833 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 NECAB3Q96P71 396 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-217ENST00000577897 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
SREBF1-217ENST00000577897 ZBTB22O15209 634 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
SREBF1-217ENST00000577897 IGFBP4P22692 258 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 NUCB2P80303 420 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 PRAMEF19Q5SWL8 479 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 TGFBRAP1Q8WUH2 860 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
SREBF1-217ENST00000577897 AATFQ9NY61 560 aaKnown RBP eCLIP16.51■□□□□ 0.231e-7■□□□□ 8.1
SREBF1-217ENST00000577897 GH2P01242 217 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 ADORA2AP29274 412 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 PBX2P40425 430 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 ANKRD1Q15327 319 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 AKNAD1Q5T1N1 836 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 OLFML2BQ68BL8 750 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 KCNB2Q92953 911 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 SNX27Q96L92 541 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
SREBF1-217ENST00000577897 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
SREBF1-217ENST00000577897 FLT1P17948 1338 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms