RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
GGA3-203ENST00000577435 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
GGA3-203ENST00000577435 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 ZNF213O14771 459 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 UBXN2AP68543 259 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 MLLT1Q03111 559 aaPredicted RBP16.53■□□□□ 0.24
GGA3-203ENST00000577435 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 SOCS4Q8WXH5 440 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 SPATC1LQ9H0A9 340 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 IL25Q9H293 177 aa16.53■□□□□ 0.24
GGA3-203ENST00000577435 RNF41Q9H4P4 317 aaPredicted RBP16.53■□□□□ 0.24
GGA3-203ENST00000577435 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
GGA3-203ENST00000577435 HAND2P61296 217 aa16.52■□□□□ 0.24
GGA3-203ENST00000577435 MOV10L1Q9BXT6 1211 aaKnown RBP16.52■□□□□ 0.24
GGA3-203ENST00000577435 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
GGA3-203ENST00000577435 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
GGA3-203ENST00000577435 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
GGA3-203ENST00000577435 SLC15A5A6NIM6 579 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 VWA5AO00534 786 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 STRNO43815 780 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 RAD21O60216 631 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 PTPREP23469 700 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 MTFR1Q15390 333 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
GGA3-203ENST00000577435 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
GGA3-203ENST00000577435 TTC14Q96N46 770 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
GGA3-203ENST00000577435 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
GGA3-203ENST00000577435 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
GGA3-203ENST00000577435 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
GGA3-203ENST00000577435 SGSM2O43147 1006 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 NMT2O60551 498 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 PLA2G6O60733 806 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 SLC25A27O95847 323 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 INHAP05111 366 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 ELNP15502 786 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 RGS2P41220 211 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 TMEM132BQ14DG7 1078 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 IMMTQ16891 758 aaKnown RBP16.5■□□□□ 0.23
GGA3-203ENST00000577435 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
GGA3-203ENST00000577435 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
GGA3-203ENST00000577435 MROH8Q9H579 483 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
GGA3-203ENST00000577435 HMGCRP04035 888 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 GJB1P08034 283 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 HOXC6P09630 235 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 FDX1P10109 184 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 BMP3P12645 472 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 CCL5P13501 91 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 CAPN2P17655 700 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 ERCC3P19447 782 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 CYP2B6P20813 491 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 GRB14Q14449 540 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
GGA3-203ENST00000577435 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 ABRAQ8N0Z2 381 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 ESR2Q92731 530 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
GGA3-203ENST00000577435 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
GGA3-203ENST00000577435 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 NEFLP07196 543 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
GGA3-203ENST00000577435 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
GGA3-203ENST00000577435 COPB2P35606 906 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 STAT3P40763 770 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 RNF208Q9H0X6 261 aa16.48■□□□□ 0.23
GGA3-203ENST00000577435 ZNF214Q9UL59 606 aaPredicted RBP16.48■□□□□ 0.23
GGA3-203ENST00000577435 MYCP01106 439 aaPredicted RBP16.47■□□□□ 0.23
GGA3-203ENST00000577435 MCCP23508 829 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 SLC1A4P43007 532 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 GJA8P48165 433 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 PTH1RQ03431 593 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 PLS1Q14651 629 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 CHURC1Q8WUH1 139 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 TRIB2Q92519 343 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 APBA2Q99767 749 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 UNC93B1Q9H1C4 597 aa16.47■□□□□ 0.23
GGA3-203ENST00000577435 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms