RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 CSRNP2Q9H175 543 aa24.38■■□□□ 1.49
KRT18P55-201ENST00000577198 EHD4Q9H223 541 aa24.38■■□□□ 1.49
KRT18P55-201ENST00000577198 BARHL2Q9NY43 387 aa24.38■■□□□ 1.49
KRT18P55-201ENST00000577198 PCDHA4Q9UN74 947 aa24.38■■□□□ 1.49
KRT18P55-201ENST00000577198 PDHBP11177 359 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 DPEP1P16444 411 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 CLCN1P35523 988 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 ZNF174Q15697 407 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 DPCR1Q3MIW9 517 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 TTC38Q5R3I4 469 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 KRBA2Q6ZNG9 492 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 SUPT20HQ8NEM7 779 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 FBXO41Q8TF61 875 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 TUBE1Q9UJT0 475 aa24.37■■□□□ 1.49
KRT18P55-201ENST00000577198 CALML3P27482 149 aa24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 RBM5P52756 815 aaKnown RBP eCLIP24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 EIF6P56537 245 aaKnown RBP24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 TCP10Q12799 353 aa24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 RASGRP4Q8TDF6 673 aa24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 MYH4Q9Y623 1939 aa24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 SNHG28P0DPA3 235 aa24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 MDM2Q00987 491 aaPredicted RBP24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 FOXP4Q8IVH2 680 aaPredicted RBP24.36■■□□□ 1.49
KRT18P55-201ENST00000577198 HLA-DOAP06340 250 aa24.35■■□□□ 1.49
KRT18P55-201ENST00000577198 PNOCQ13519 176 aa24.35■■□□□ 1.49
KRT18P55-201ENST00000577198 HEATR3Q7Z4Q2 680 aa24.35■■□□□ 1.49
KRT18P55-201ENST00000577198 DAGLBQ8NCG7 672 aa24.35■■□□□ 1.49
KRT18P55-201ENST00000577198 BIN1O00499 593 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 FOXN1O15353 648 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 SMARCA1P28370 1054 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 TRAPPC10P48553 1259 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 FAM196BA6NMK8 535 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 ATP2C1P98194 919 aaPredicted RBP24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 SHROOM1Q2M3G4 852 aaPredicted RBP24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 CCDC93Q567U6 631 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 PSMD1Q99460 953 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 UBA5Q9GZZ9 404 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 RIOX1Q9H6W3 641 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 CLIP2Q9UDT6 1046 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 PCDHA6Q9UN73 950 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 ZKSCAN5Q9Y2L8 839 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 PCDHA8Q9Y5H6 950 aa24.34■■□□□ 1.49
KRT18P55-201ENST00000577198 NPM3O75607 178 aaKnown RBP24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 TTLL1O95922 423 aa24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 NLRP12P59046 1061 aa24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 PTGDRQ13258 359 aa24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 PLA2G4DQ86XP0 818 aa24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 ELOA2Q8IYF1 753 aaPredicted RBP24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 PRMT6Q96LA8 375 aaPredicted RBP24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 FAM13BQ9NYF5 915 aa24.33■■□□□ 1.49
KRT18P55-201ENST00000577198 FRMPD2Q68DX3 1309 aaPredicted RBP24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 A0A087X0B3 334 aa24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 POLR2DO15514 142 aaKnown RBP24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 CEP57L1Q8IYX8 460 aa24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 CNNM3Q8NE01 707 aa24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 PIGSQ96S52 555 aa24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 DHX36Q9H2U1 1008 aaKnown RBP24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 TDRD3Q9H7E2 651 aaKnown RBP24.33■■□□□ 1.48
KRT18P55-201ENST00000577198 BMP15O95972 392 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 IL17AQ16552 155 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 CFAP100Q494V2 611 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 RTKN2Q8IZC4 609 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 C4orf32Q8N8J7 132 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 EPSTI1Q96J88 318 aa24.32■■□□□ 1.48
KRT18P55-201ENST00000577198 ACTN4O43707 911 aaKnown RBP24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 PTMAP06454 111 aaKnown RBP24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 HOMER1Q86YM7 354 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 CCDC148Q8NFR7 591 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 FERMT2Q96AC1 680 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 ZMYND12Q9H0C1 365 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 SERTAD1Q9UHV2 236 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 ZNF75DP51815 510 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 GRIPAP1Q4V328 841 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 GALNT17Q6IS24 598 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 AOPEPQ8N6M6 819 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 BPIFA3Q9BQP9 254 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 VAT1LQ9HCJ6 419 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 ZNF277Q9NRM2 450 aaPredicted RBP24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 PI4KBQ9UBF8 816 aa24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.31■■□□□ 1.48
KRT18P55-201ENST00000577198 ISM2Q6H9L7 571 aa24.3■■□□□ 1.48
KRT18P55-201ENST00000577198 FAM177A1Q8N128 213 aaPredicted RBP24.3■■□□□ 1.48
KRT18P55-201ENST00000577198 RRP36Q96EU6 259 aaKnown RBP24.3■■□□□ 1.48
KRT18P55-201ENST00000577198 GMLQ99445 158 aa24.3■■□□□ 1.48
KRT18P55-201ENST00000577198 MCM7P33993 719 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 ASPRV1Q53RT3 343 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 SARM1Q6SZW1 724 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 PDILTQ8N807 584 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 PCDHA5Q9Y5H7 936 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 MPHOSPH10O00566 681 aaKnown RBP24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 PRR29P0C7W0 189 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 ZNF543Q08ER8 600 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 TATDN1Q6P1N9 297 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 RSBN1LQ6PCB5 846 aaPredicted RBP24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 SYMPKQ92797 1274 aaKnown RBP24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 CCDC17Q96LX7 622 aa24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 ZNF830Q96NB3 372 aaPredicted RBP24.29■■□□□ 1.48
KRT18P55-201ENST00000577198 ATRNL1Q5VV63 1379 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms