RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
NUP88-213ENST00000576862 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 ZNF792Q3KQV3 632 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 DCAF15Q66K64 600 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 CBLL1Q75N03 491 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
NUP88-213ENST00000576862 KLHL6Q8WZ60 621 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
NUP88-213ENST00000576862 FAM86C1Q9NVL1 165 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 ADGRE2Q9UHX3 823 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
NUP88-213ENST00000576862 RNASE1P07998 156 aaKnown RBP8.49□□□□□ -1.05
NUP88-213ENST00000576862 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
NUP88-213ENST00000576862 CREG2Q8IUH2 290 aa8.49□□□□□ -1.05
NUP88-213ENST00000576862 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
NUP88-213ENST00000576862 C7orf61Q8IZ16 206 aa8.49□□□□□ -1.05
NUP88-213ENST00000576862 SYTL5Q8TDW5 730 aaPredicted RBP8.49□□□□□ -1.05
NUP88-213ENST00000576862 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
NUP88-213ENST00000576862 DUSP13Q9UII6 198 aa8.49□□□□□ -1.05
NUP88-213ENST00000576862 SIGLEC6O43699 453 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 PRAMEF1O95521 474 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 DAGLBQ8NCG7 672 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 PI4K2BQ8TCG2 481 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 PCDHB12Q9Y5F1 795 aa8.48□□□□□ -1.05
NUP88-213ENST00000576862 CBFA2T2O43439 604 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 BBS9Q3SYG4 887 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 GNPTABQ3T906 1256 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 ASCC2Q9H1I8 757 aaPredicted RBP8.47□□□□□ -1.05
NUP88-213ENST00000576862 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 PCDHA11Q9Y5I1 949 aa8.47□□□□□ -1.05
NUP88-213ENST00000576862 SLC7A5Q01650 507 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 TNNI3KQ59H18 835 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 TCTN2Q96GX1 697 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 GP6Q9HCN6 339 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 PRR13Q9NZ81 148 aa8.46□□□□□ -1.06
NUP88-213ENST00000576862 CD247P20963 164 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 CTSKP43235 329 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 EGR3Q06889 387 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 ZNF655Q8N720 491 aaPredicted RBP8.45□□□□□ -1.06
NUP88-213ENST00000576862 LRRN4CLQ8ND94 238 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 HAUS7Q99871 368 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 C19orf73Q9NVV2 129 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 ACTR10Q9NZ32 417 aa8.45□□□□□ -1.06
NUP88-213ENST00000576862 LTKP29376 864 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 ZNF445P59923 1031 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 TEKQ02763 1124 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 KIAA1211LQ6NV74 962 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 VHLLQ6RSH7 139 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 RC3H2Q9HBD1 1191 aaKnown RBP8.44□□□□□ -1.06
NUP88-213ENST00000576862 SUSD2Q9UGT4 822 aa8.44□□□□□ -1.06
NUP88-213ENST00000576862 DNAJC25-GNG10A0A024R161 153 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 MEIS1O00470 390 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 RALGPS1Q5JS13 557 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 MICAL1Q8TDZ2 1067 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 HNRNPLLQ8WVV9 542 aaKnown RBP8.43□□□□□ -1.06
NUP88-213ENST00000576862 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 TANGO6Q9C0B7 1094 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 SLAMF8Q9P0V8 285 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
NUP88-213ENST00000576862 EPHX1P07099 455 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 IRAK1P51617 712 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 BRF1Q92994 677 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 FOXP3Q9BZS1 431 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 ADAMTS10Q9H324 1103 aa8.42□□□□□ -1.06
NUP88-213ENST00000576862 B2RBV5 119 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 KLF4O43474 513 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 LARP1BQ659C4 914 aaKnown RBP8.41□□□□□ -1.06
NUP88-213ENST00000576862 HEATR6Q6AI08 1181 aaKnown RBP8.41□□□□□ -1.06
NUP88-213ENST00000576862 C6orf15Q6UXA7 325 aaPredicted RBP8.41□□□□□ -1.06
NUP88-213ENST00000576862 RNF111Q6ZNA4 994 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 ZNF513Q8N8E2 541 aaPredicted RBP8.41□□□□□ -1.06
NUP88-213ENST00000576862 TCFL5Q9UL49 500 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 CTNND2Q9UQB3 1225 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 FHOD1Q9Y613 1164 aa8.41□□□□□ -1.06
NUP88-213ENST00000576862 TCEAL1Q15170 157 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 FAM178BQ8IXR5 827 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 CELF2-AS1Q8N7Q2 184 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 EBF1Q9UH73 591 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 TMEM59LQ9UK28 342 aa8.4□□□□□ -1.06
NUP88-213ENST00000576862 A0A087WZG4 1122 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 TMEM82A0PJX8 343 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 H0Y8X5 98 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 SYPP08247 313 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 ZGLP1P0C6A0 271 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 ITGA4P13612 1032 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 ITGB5P18084 799 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 BMP8BP34820 402 aa8.39□□□□□ -1.07
NUP88-213ENST00000576862 PCBP3P57721 371 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms