RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ERCC5P28715 1186 aaPredicted RBP19.89■□□□□ 0.78
ATPAF1-214ENST00000576409 GUCY2DQ02846 1103 aa19.89■□□□□ 0.78
ATPAF1-214ENST00000576409 NAA25Q14CX7 972 aa19.89■□□□□ 0.78
ATPAF1-214ENST00000576409 UBE3CQ15386 1083 aa19.89■□□□□ 0.78
ATPAF1-214ENST00000576409 KRT71Q3SY84 523 aa19.89■□□□□ 0.78
ATPAF1-214ENST00000576409 CHMP2AO43633 222 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 EZRP15311 586 aaKnown RBP19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 DNM2P50570 870 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 RASSF7Q02833 373 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 CFAP221Q4G0U5 840 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 RDH13Q8NBN7 331 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 CAPS2Q9BXY5 557 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 DENND2AQ9ULE3 1009 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 EHHADHQ08426 723 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 LRRC41Q15345 812 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 TBC1D5Q92609 795 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 GSDMAQ96QA5 445 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 CRB1P82279 1406 aa19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
ATPAF1-214ENST00000576409 TET3O43151 1660 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 KIF4AO95239 1232 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 GLI2P10070 1586 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 SCG2P13521 617 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 IFNAR1P17181 557 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 USP49Q70CQ1 688 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 NUP58Q9BVL2 599 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 SERPINA10Q9UK55 444 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 UNC13BO14795 1591 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 H7C1D1 291 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 PCCAP05165 728 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 CETN2P41208 172 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 B4GALNT4Q76KP1 1039 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 PNMA1Q8ND90 353 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 FAM71BQ8TC56 605 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 HDAC6Q9UBN7 1215 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 ZBTB1Q9Y2K1 713 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 E9PCH4 1651 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 KCNK3O14649 394 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 GTPBP6O43824 516 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 ABCB4P21439 1286 aa19.88■□□□□ 0.77
ATPAF1-214ENST00000576409 FMNL1O95466 1100 aaPredicted RBP19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 ERMNQ8TAM6 284 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 TRIM49BA6NDI0 452 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 KCNQ4P56696 695 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 KRT31Q15323 416 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 MED23Q9ULK4 1368 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 DPH5Q9H2P9 285 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 CYP27B1O15528 508 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 GUCY1A2P33402 732 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 COL9A3Q14050 684 aaPredicted RBP19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 RPS6KA1Q15418 735 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 PAGE5Q96GU1 130 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 FUCA2Q9BTY2 467 aa19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 FOXP1Q9H334 677 aaPredicted RBP19.87■□□□□ 0.77
ATPAF1-214ENST00000576409 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 PLEKHA8P1O95397 391 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 CCDC65Q8IXS2 484 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 ANKS4BQ8N8V4 417 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 PCDHB13Q9Y5F0 798 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 TRIM66O15016 1216 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 CETN3O15182 167 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 CTIFO43310 598 aaKnown RBP19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 CTDNEP1O95476 244 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 HLA-DOAP06340 250 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 PAK2Q13177 524 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 SUGCTQ9HAC7 445 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 UBE2Q2LH0YL09 131 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 PLCB3Q01970 1234 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 TPTE2Q6XPS3 522 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 CCDC84Q86UT8 332 aaPredicted RBP19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 BAIAP2L1Q9UHR4 511 aa19.86■□□□□ 0.77
ATPAF1-214ENST00000576409 FAM13AO94988 1023 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 NDUFA10O95299 355 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 POLR2FP61218 127 aaKnown RBP19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 HS2ST1Q7LGA3 356 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 CNOT6LQ96LI5 555 aaKnown RBP19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 ERBB3P21860 1342 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 CALCRLQ16602 461 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 SLF2Q8IX21 1173 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 LMBR1Q8WVP7 490 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 EXOC4Q96A65 974 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 SPDYE3A6NKU9 549 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 CALRP27797 417 aaKnown RBP19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 GSTO1P78417 241 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 ASIC2Q16515 512 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 CPVLQ9H3G5 476 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 MED4Q9NPJ6 270 aa19.85■□□□□ 0.77
ATPAF1-214ENST00000576409 BUB1BO60566 1050 aaPredicted RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 RASGRF1Q13972 1273 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 SFMBT2Q5VUG0 894 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 RESP18Q5W5W9 173 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 MGARPQ8TDB4 240 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 FBF1Q8TES7 1133 aa19.84■□□□□ 0.77
ATPAF1-214ENST00000576409 SMCR8Q8TEV9 937 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms