RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ATG4CQ96DT6 458 aa27.76■■■□□ 2.03
SNF8-217ENST00000576353 NUDT12Q9BQG2 462 aa27.76■■■□□ 2.03
SNF8-217ENST00000576353 BIN2Q9UBW5 565 aaPredicted RBP27.76■■■□□ 2.03
SNF8-217ENST00000576353 SGSM2O43147 1006 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 NMT2O60551 498 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 RGS19P49795 217 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 ERICH6BQ5W0A0 696 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 SLFN13Q68D06 897 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 SOCS4Q8WXH5 440 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 ESR2Q92731 530 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 NUP88Q99567 741 aaPredicted RBP27.75■■■□□ 2.03
SNF8-217ENST00000576353 TMEM106CQ9BVX2 250 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 FBXO28Q9NVF7 368 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 PPP1R9AQ9ULJ8 1098 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 ADAMTS5Q9UNA0 930 aa27.75■■■□□ 2.03
SNF8-217ENST00000576353 NOVP48745 357 aa27.74■■■□□ 2.03
SNF8-217ENST00000576353 SKAP1Q86WV1 359 aa27.74■■■□□ 2.03
SNF8-217ENST00000576353 SLF1Q9BQI6 1058 aa27.74■■■□□ 2.03
SNF8-217ENST00000576353 SPATC1LQ9H0A9 340 aa27.74■■■□□ 2.03
SNF8-217ENST00000576353 MGAMO43451 1857 aa27.73■■■□□ 2.03
SNF8-217ENST00000576353 UBXN2AP68543 259 aa27.73■■■□□ 2.03
SNF8-217ENST00000576353 WDR78Q5VTH9 848 aa27.73■■■□□ 2.03
SNF8-217ENST00000576353 VWA5AO00534 786 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 PLS1Q14651 629 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 PRPF38AQ8NAV1 312 aaKnown RBP27.72■■■□□ 2.03
SNF8-217ENST00000576353 SHCBP1Q8NEM2 672 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 GMCL1Q96IK5 515 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 TTC14Q96N46 770 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 MOV10L1Q9BXT6 1211 aaKnown RBP27.72■■■□□ 2.03
SNF8-217ENST00000576353 FEM1BQ9UK73 627 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 IVNS1ABPQ9Y6Y0 642 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 HTTP42858 3142 aa27.72■■■□□ 2.03
SNF8-217ENST00000576353 BMP3P12645 472 aa27.71■■■□□ 2.03
SNF8-217ENST00000576353 ELNP15502 786 aa27.71■■■□□ 2.03
SNF8-217ENST00000576353 U3KPZ7 1027 aaPredicted RBP27.71■■■□□ 2.03
SNF8-217ENST00000576353 NEDD4P46934 1319 aa27.7■■■□□ 2.03
SNF8-217ENST00000576353 TOP1P11387 765 aaKnown RBP27.7■■■□□ 2.02
SNF8-217ENST00000576353 XRCC5P13010 732 aaKnown RBP27.7■■■□□ 2.02
SNF8-217ENST00000576353 RGS2P41220 211 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 SLC1A4P43007 532 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 PTH1RQ03431 593 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 CCDC178Q5BJE1 867 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 MORN1Q5T089 497 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 KIAA1211Q6ZU35 1233 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 KRT23Q9C075 422 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 MROH8Q9H579 483 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 CNNM2Q9H8M5 875 aa27.7■■■□□ 2.02
SNF8-217ENST00000576353 SLC15A5A6NIM6 579 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 STRNO43815 780 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 SLC25A27O95847 323 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 MYCP01106 439 aaPredicted RBP27.69■■■□□ 2.02
SNF8-217ENST00000576353 CYP2B6P20813 491 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 PTPREP23469 700 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 MCCP23508 829 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 TMEM132BQ14DG7 1078 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 TRMT44Q8IYL2 757 aaKnown RBP27.69■■■□□ 2.02
SNF8-217ENST00000576353 USP6NLQ92738 828 aa27.69■■■□□ 2.02
SNF8-217ENST00000576353 ISY1Q9ULR0 285 aaKnown RBP27.69■■■□□ 2.02
SNF8-217ENST00000576353 KDM4AO75164 1064 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 ERCC3P19447 782 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 IQCA1Q86XH1 822 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 CHURC1Q8WUH1 139 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 TMEM47Q9BQJ4 181 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
SNF8-217ENST00000576353 CTDP1Q9Y5B0 961 aaPredicted RBP27.68■■■□□ 2.02
SNF8-217ENST00000576353 ZBED4O75132 1171 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 INHAP05111 366 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 STAT3P40763 770 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 MAP2K5Q13163 448 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 RCSD1Q6JBY9 416 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 FAM160B2Q86V87 743 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 NCAPG2Q86XI2 1143 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 KIFC2Q96AC6 838 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 RLFQ13129 1914 aa27.67■■■□□ 2.02
SNF8-217ENST00000576353 B4E1Z4 1266 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 TMEM232C9JQI7 657 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 HMGCRP04035 888 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 FDX1P10109 184 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 COPB2P35606 906 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 STAT2P52630 851 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 MTFR1Q15390 333 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 DGKHQ86XP1 1220 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 RIOX2Q8IUF8 465 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 MAP4K1Q92918 833 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 ESYT1Q9BSJ8 1104 aa27.66■■■□□ 2.02
SNF8-217ENST00000576353 POTEFA5A3E0 1075 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 PLA2G6O60733 806 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 CCL5P13501 91 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 MLLT1Q03111 559 aaPredicted RBP27.65■■■□□ 2.02
SNF8-217ENST00000576353 TRDNQ13061 729 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 GRB14Q14449 540 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 CASC1Q6TDU7 716 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 REPS2Q8NFH8 660 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 DCAF4Q8WV16 495 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 APBA2Q99767 749 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 ZSWIM5Q9P217 1185 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 ZNF214Q9UL59 606 aaPredicted RBP27.65■■■□□ 2.02
SNF8-217ENST00000576353 MYH4Q9Y623 1939 aa27.65■■■□□ 2.02
SNF8-217ENST00000576353 CYP21A2P08686 494 aa27.64■■■□□ 2.02
SNF8-217ENST00000576353 IKQ13123 557 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms