RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 GINM1Q9NU53 330 aa9.05□□□□□ -0.96
RAB40B-210ENST00000576148 CHD6Q8TD26 2715 aa9.05□□□□□ -0.96
RAB40B-210ENST00000576148 UMODL1Q5DID0 1318 aa9.05□□□□□ -0.96
RAB40B-210ENST00000576148 ASGR1P07306 291 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ZNF853P0CG23 659 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ACTN1P12814 892 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 TAL1P17542 331 aaPredicted RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ERCC3P19447 782 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 GNAI1P63096 354 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ACAP1Q15027 740 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 PUM3Q15397 648 aaKnown RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 DZIP1Q86YF9 867 aaKnown RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 HERC6Q8IVU3 1022 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 VGLL2Q8N8G2 317 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 FAM163AQ96GL9 167 aaPredicted RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 FEZ1Q99689 392 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 TINF2Q9BSI4 451 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 GNL3LQ9NVN8 582 aaKnown RBP9.04□□□□□ -0.96
RAB40B-210ENST00000576148 IFT57Q9NWB7 429 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 FAM184BQ9ULE4 1060 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 ACACBO00763 2458 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 SALL1Q9NSC2 1324 aa9.04□□□□□ -0.96
RAB40B-210ENST00000576148 TRIOO75962 3097 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 TECTAO75443 2155 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 ROBO3Q96MS0 1386 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 KDM4AO75164 1064 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 C6orf222P0C671 652 aaPredicted RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 ZNF865P0CJ78 1059 aaPredicted RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 FCER1AP12319 257 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 AVPR2P30518 371 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 NBL1P41271 181 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 NUBP1P53384 320 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 JAG1P78504 1218 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 ZYXQ15942 572 aaKnown RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 ST3GAL2Q16842 350 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 EP400NLQ6ZTU2 488 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 SPRED2Q7Z698 418 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 CCDC146Q8IYE0 955 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 NKD2Q969F2 451 aaPredicted RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 RMDN1Q96DB5 314 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 C12orf42Q96LP6 360 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 NOC4LQ9BVI4 516 aaKnown RBP9.03□□□□□ -0.96
RAB40B-210ENST00000576148 TRIM34Q9BYJ4 488 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 SPATC1LQ9H0A9 340 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 WNT8AQ9H1J5 351 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 MROH8Q9H579 483 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 COL4A6Q14031 1691 aa9.03□□□□□ -0.96
RAB40B-210ENST00000576148 MYADML2A6NDP7 307 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 SPDYE16A6NNV3 312 aaPredicted RBP9.02□□□□□ -0.97
RAB40B-210ENST00000576148 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
RAB40B-210ENST00000576148 FGFR2P21802 821 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 CST5P28325 142 aaPredicted RBP9.02□□□□□ -0.97
RAB40B-210ENST00000576148 USP14P54578 494 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 VCPP55072 806 aaKnown RBP9.02□□□□□ -0.97
RAB40B-210ENST00000576148 RHBDL3P58872 404 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 FLIIQ13045 1269 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 PUM1Q14671 1186 aaKnown RBP eCLIP9.02□□□□□ -0.97
RAB40B-210ENST00000576148 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 SCLYQ96I15 445 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 SUGCTQ9HAC7 445 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 HOXC10Q9NYD6 342 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 GVINP1Q7Z2Y8 2422 aa9.02□□□□□ -0.97
RAB40B-210ENST00000576148 GPR75-ASB3A0A0A6YYF3 556 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 GRM8O00222 908 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 GDF11O95390 407 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 MAP4K4O95819 1239 aaPredicted RBP9.01□□□□□ -0.97
RAB40B-210ENST00000576148 VCAM1P19320 739 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 ZXDAP98168 799 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 CALD1Q05682 793 aaKnown RBP9.01□□□□□ -0.97
RAB40B-210ENST00000576148 PLS1Q14651 629 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 DEFB128Q7Z7B8 93 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
RAB40B-210ENST00000576148 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 LPIN2Q92539 896 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 PABPC5Q96DU9 382 aaKnown RBP9.01□□□□□ -0.97
RAB40B-210ENST00000576148 CDCA7LQ96GN5 454 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
RAB40B-210ENST00000576148 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 MTUS1Q9ULD2 1270 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 DENND2AQ9ULE3 1009 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 MROH7-TTC4A0A0A0MT08 1334 aa9.01□□□□□ -0.97
RAB40B-210ENST00000576148 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
RAB40B-210ENST00000576148 SEMA3EO15041 775 aa9□□□□□ -0.97
RAB40B-210ENST00000576148 GALR2O43603 387 aaPredicted RBP9□□□□□ -0.97
RAB40B-210ENST00000576148 COG2Q14746 738 aa9□□□□□ -0.97
RAB40B-210ENST00000576148 SHROOM1Q2M3G4 852 aaPredicted RBP9□□□□□ -0.97
RAB40B-210ENST00000576148 SPTY2D1Q68D10 685 aaPredicted RBP9□□□□□ -0.97
RAB40B-210ENST00000576148 MCTP2Q6DN12 878 aa9□□□□□ -0.97
RAB40B-210ENST00000576148 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms