RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	CAPN5	O15484	640 aa	Predicted RBP	11.71	□□□□□ -0.53
NXN-208	ENST00000575171	ZIC2	O95409	532 aa	Predicted RBP	11.71	□□□□□ -0.53
NXN-208	ENST00000575171	BAG3	O95817	575 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	TIMP2	P16035	220 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	PDE6A	P16499	860 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	SOX10	P56693	466 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	PRAMEF18	Q5VWM3	479 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	RGMB	Q6NW40	437 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	ADGRA1	Q86SQ6	560 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	KBTBD3	Q8NAB2	608 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	RILPL2	Q969X0	211 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	PGPEP1	Q9NXJ5	209 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	CEP290	O15078	2479 aa		11.71	□□□□□ -0.53
NXN-208	ENST00000575171	GPR75-ASB3	A0A0A6YYF3	556 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	IGSF3	O75054	1194 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	CHGB	P05060	677 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	TNNI2	P48788	182 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	DYNLL1	P63167	89 aa	Known RBP	11.7	□□□□□ -0.54
NXN-208	ENST00000575171	KIF23	Q02241	960 aa	Predicted RBP	11.7	□□□□□ -0.54
NXN-208	ENST00000575171	PICALM	Q13492	652 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	TNFAIP1	Q13829	316 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	SLFNL1	Q499Z3	407 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	ZSCAN25	Q6NSZ9	544 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	SKAP1	Q86WV1	359 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	ITPKC	Q96DU7	683 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	CDCA5	Q96FF9	252 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	DEFB129	Q9H1M3	183 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	ALG2	Q9H553	416 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	GBA2	Q9HCG7	927 aa	Predicted RBP	11.7	□□□□□ -0.54
NXN-208	ENST00000575171	AAAS	Q9NRG9	546 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	RNF186	Q9NXI6	227 aa		11.7	□□□□□ -0.54
NXN-208	ENST00000575171	KIAA0100	Q14667	2235 aa	Known RBP	11.7	□□□□□ -0.54
NXN-208	ENST00000575171	ERVH48-1	M5A8F1	160 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	TRAK2	O60296	914 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	ADD2	P35612	726 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	TCP10	Q12799	353 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	NFIA	Q12857	509 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	RASA3	Q14644	834 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.69	□□□□□ -0.54
NXN-208	ENST00000575171	TEX11	Q8IYF3	940 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.69	□□□□□ -0.54
NXN-208	ENST00000575171	EVI5L	Q96CN4	794 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	OSBPL3	Q9H4L5	887 aa		11.69	□□□□□ -0.54
NXN-208	ENST00000575171	TCRBV5S4A2T	A0A5A2	114 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	ST8SIA5	O15466	376 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	RNF113A	O15541	343 aa	Known RBP	11.68	□□□□□ -0.54
NXN-208	ENST00000575171	NF2	P35240	595 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	RGS3	P49796	1198 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	RHBDL3	P58872	404 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	CSRNP1	Q96S65	589 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	ZFAND3	Q9H8U3	227 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	PPP2R3B	Q9Y5P8	575 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	MYH13	Q9UKX3	1938 aa		11.68	□□□□□ -0.54
NXN-208	ENST00000575171	TRPA1	O75762	1119 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	MBD4	O95243	580 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	USP5	P45974	858 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	PRKG1	Q13976	671 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	UBE3C	Q15386	1083 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	TTC22	Q5TAA0	569 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	TMED8	Q6PL24	325 aa	Predicted RBP	11.67	□□□□□ -0.54
NXN-208	ENST00000575171	MAPKAPK5	Q8IW41	473 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.67	□□□□□ -0.54
NXN-208	ENST00000575171	TMEM39B	Q9GZU3	492 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	ARMT1	Q9H993	441 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	TMPRSS4	Q9NRS4	437 aa		11.67	□□□□□ -0.54
NXN-208	ENST00000575171	LCE2B	O14633	110 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	WDHD1	O75717	1129 aa	Predicted RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	ZFY	P08048	801 aa	Predicted RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	GSPT1	P15170	499 aa	Known RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	FKBP1C	Q5VVH2	108 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	CTU1	Q7Z7A3	348 aa	Known RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	FAM83A	Q86UY5	434 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	RASAL3	Q86YV0	1011 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	CERS3	Q8IU89	383 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	RNF135	Q8IUD6	432 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	LCORL	Q8N3X6	602 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	ADAMTS19	Q8TE59	1207 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	TGFBRAP1	Q8WUH2	860 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	FAM151A	Q8WW52	585 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	APPBP2	Q92624	585 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	RIOK1	Q9BRS2	568 aa	Known RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	IDI2	Q9BXS1	227 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171	DDX4	Q9NQI0	724 aa	Known RBP	11.66	□□□□□ -0.54
NXN-208	ENST00000575171	MAST2	Q6P0Q8	1798 aa		11.66	□□□□□ -0.54
NXN-208	ENST00000575171		M0R2C6	588 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	ENTPD3	O75355	529 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	ZNF157	P51786	506 aa	Predicted RBP	11.65	□□□□□ -0.54
NXN-208	ENST00000575171	SLC4A8	Q2Y0W8	1093 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	SUPT20HL1	Q3ZLR7	823 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	ZFPM1	Q8IX07	1006 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	PHTF2	Q8N3S3	785 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	C2orf69	Q8N8R5	385 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	GLMN	Q92990	594 aa		11.65	□□□□□ -0.54
NXN-208	ENST00000575171	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.65	□□□□□ -0.54
NXN-208	ENST00000575171	PUS7L	Q9H0K6	701 aa	Known RBP	11.65	□□□□□ -0.54
NXN-208	ENST00000575171	RFX7	Q2KHR2	1363 aa		11.65	□□□□□ -0.55
NXN-208	ENST00000575171	FLT1	P17948	1338 aa		11.64	□□□□□ -0.55
NXN-208	ENST00000575171	SDR42E1	Q8WUS8	393 aa		11.64	□□□□□ -0.55
NXN-208	ENST00000575171	OSBP2	Q969R2	916 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms