RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 SH2D4AQ9H788 454 aa24.63■■□□□ 1.53
CXCL16-203ENST00000574412 AS3MTQ9HBK9 375 aa24.63■■□□□ 1.53
CXCL16-203ENST00000574412 GOPCQ9HD26 462 aa24.63■■□□□ 1.53
CXCL16-203ENST00000574412 ZDHHC9Q9Y397 364 aa24.63■■□□□ 1.53
CXCL16-203ENST00000574412 PALM3A6NDB9 673 aaPredicted RBP24.62■■□□□ 1.53
CXCL16-203ENST00000574412 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 SLC1A4P43007 532 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 CPLX2Q6PUV4 134 aaKnown RBP24.62■■□□□ 1.53
CXCL16-203ENST00000574412 ZNF280CQ8ND82 737 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 OTUD5Q96G74 571 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 MAP3K14Q99558 947 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 VCPKMTQ9H867 229 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 PTPRFP10586 1907 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 hCG_1642624A0A1W2PR95 340 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 ZNF543Q08ER8 600 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 TTBK2Q6IQ55 1244 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 C2orf69Q8N8R5 385 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 ZNF784Q8NCA9 323 aaPredicted RBP24.62■■□□□ 1.53
CXCL16-203ENST00000574412 LLPHQ9BRT6 129 aaKnown RBP24.62■■□□□ 1.53
CXCL16-203ENST00000574412 WDR18Q9BV38 432 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 SLC26A6Q9BXS9 759 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 UBA5Q9GZZ9 404 aa24.62■■□□□ 1.53
CXCL16-203ENST00000574412 USP17L10C9JJH3 530 aa24.61■■□□□ 1.53
CXCL16-203ENST00000574412 KLRF2D3W0D1 207 aa24.61■■□□□ 1.53
CXCL16-203ENST00000574412 LDLRAD1Q5T700 205 aa24.61■■□□□ 1.53
CXCL16-203ENST00000574412 SMARCC2Q8TAQ2 1214 aa24.61■■□□□ 1.53
CXCL16-203ENST00000574412 DCAF4Q8WV16 495 aa24.61■■□□□ 1.53
CXCL16-203ENST00000574412 CDKL5O76039 1030 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 BRD1O95696 1058 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 IFNAR1P17181 557 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 FOSBP53539 338 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 PPP2R5BQ15173 497 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 ASPRV1Q53RT3 343 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 KIAA1683Q9H0B3 1180 aa24.6■■□□□ 1.53
CXCL16-203ENST00000574412 SLC16A2P36021 539 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 SLC35G1Q2M3R5 365 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 FAM83BQ5T0W9 1011 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 SMC1BQ8NDV3 1235 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 GMCL1Q96IK5 515 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 ORC3Q9UBD5 711 aaPredicted RBP24.59■■□□□ 1.53
CXCL16-203ENST00000574412 SYNPO2Q9UMS6 1093 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 CNTNAP5Q8WYK1 1306 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 BMP3P12645 472 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 FDPSP14324 419 aaKnown RBP24.59■■□□□ 1.53
CXCL16-203ENST00000574412 SYT1P21579 422 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 HMGCS2P54868 508 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 BACE1P56817 501 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 SSRP1Q08945 709 aaKnown RBP24.59■■□□□ 1.53
CXCL16-203ENST00000574412 FUT2Q10981 343 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 ERO1BQ86YB8 467 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 OPTNQ96CV9 577 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 VAT1LQ9HCJ6 419 aa24.59■■□□□ 1.53
CXCL16-203ENST00000574412 FKBP1BP68106 108 aa24.58■■□□□ 1.53
CXCL16-203ENST00000574412 FAM184AQ8NB25 1140 aa24.58■■□□□ 1.53
CXCL16-203ENST00000574412 SLC10A4Q96EP9 437 aa24.58■■□□□ 1.53
CXCL16-203ENST00000574412 EMILIN3Q9NT22 766 aa24.58■■□□□ 1.53
CXCL16-203ENST00000574412 SPDYE5A6NIY4 337 aa24.57■■□□□ 1.52
CXCL16-203ENST00000574412 CYTH3O43739 400 aa24.57■■□□□ 1.52
CXCL16-203ENST00000574412 FMNL1O95466 1100 aaPredicted RBP24.57■■□□□ 1.52
CXCL16-203ENST00000574412 GNAQP50148 359 aa24.57■■□□□ 1.52
CXCL16-203ENST00000574412 IKQ13123 557 aaPredicted RBP24.57■■□□□ 1.52
CXCL16-203ENST00000574412 GPATCH4Q5T3I0 446 aaKnown RBP24.57■■□□□ 1.52
CXCL16-203ENST00000574412 SAMD1Q6SPF0 538 aaPredicted RBP24.57■■□□□ 1.52
CXCL16-203ENST00000574412 AIFM3Q96NN9 605 aa24.57■■□□□ 1.52
CXCL16-203ENST00000574412 V9GY48 417 aaPredicted RBP24.57■■□□□ 1.52
CXCL16-203ENST00000574412 PASKQ96RG2 1323 aa24.57■■□□□ 1.52
CXCL16-203ENST00000574412 TMEM232C9JQI7 657 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 IRF6O14896 467 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 TOMM70O94826 608 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 HMGN5P82970 282 aaKnown RBP24.56■■□□□ 1.52
CXCL16-203ENST00000574412 NBR1Q14596 966 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 TRIM22Q8IYM9 498 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
CXCL16-203ENST00000574412 STX6O43752 255 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 PPATQ06203 517 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 HOMER1Q86YM7 354 aa24.56■■□□□ 1.52
CXCL16-203ENST00000574412 VCAM1P19320 739 aa24.55■■□□□ 1.52
CXCL16-203ENST00000574412 GJA5P36382 358 aa24.55■■□□□ 1.52
CXCL16-203ENST00000574412 USP14P54578 494 aa24.55■■□□□ 1.52
CXCL16-203ENST00000574412 HUNKP57058 714 aa24.55■■□□□ 1.52
CXCL16-203ENST00000574412 MKRN3Q13064 507 aaKnown RBP24.55■■□□□ 1.52
CXCL16-203ENST00000574412 FOXD4L5Q5VV16 416 aaPredicted RBP24.55■■□□□ 1.52
CXCL16-203ENST00000574412 RBM46Q8TBY0 533 aaKnown RBP24.55■■□□□ 1.52
CXCL16-203ENST00000574412 FOXD4L4Q8WXT5 416 aaPredicted RBP24.55■■□□□ 1.52
CXCL16-203ENST00000574412 AKAP17AQ02040 695 aaKnown RBP24.54■■□□□ 1.52
CXCL16-203ENST00000574412 LARP1BQ659C4 914 aaKnown RBP24.54■■□□□ 1.52
CXCL16-203ENST00000574412 CLEC17AQ6ZS10 378 aa24.54■■□□□ 1.52
CXCL16-203ENST00000574412 LZTS2Q9BRK4 669 aa24.54■■□□□ 1.52
CXCL16-203ENST00000574412 RNF26Q9BY78 433 aaPredicted RBP24.54■■□□□ 1.52
CXCL16-203ENST00000574412 GJB4Q9NTQ9 266 aa24.54■■□□□ 1.52
CXCL16-203ENST00000574412 FBXO28Q9NVF7 368 aa24.54■■□□□ 1.52
CXCL16-203ENST00000574412 PDCP20941 246 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 ADGRF4Q8IZF3 695 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 LPAR1Q92633 364 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 SPZ1Q9BXG8 430 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 TANGO6Q9C0B7 1094 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 STK36Q9NRP7 1315 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 C19orf81C9J6K1 198 aa24.53■■□□□ 1.52
CXCL16-203ENST00000574412 SNAP25P60880 206 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms