RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 TMEM87BQ96K49 555 aa38.85■■■■□ 3.81
CTDNEP1-209ENST00000574205 CPA4Q9UI42 421 aa38.85■■■■□ 3.81
CTDNEP1-209ENST00000574205 FLOT1O75955 427 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 BMP3P12645 472 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 IGDCC4Q8TDY8 1250 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 HOXC10Q9NYD6 342 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 WTAPQ15007 396 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 TMEM67Q5HYA8 995 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 LBX2Q6XYB7 198 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 DCAF4Q8WV16 495 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 MTMR7Q9Y216 660 aa38.84■■■■□ 3.81
CTDNEP1-209ENST00000574205 MYPNQ86TC9 1320 aa38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 BCRP11274 1271 aa38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 DHX32Q7L7V1 743 aaKnown RBP38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 ZNF296Q8WUU4 475 aaPredicted RBP38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 JAKMIP1Q96N16 626 aaKnown RBP38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 WDR19Q8NEZ3 1342 aa38.83■■■■□ 3.81
CTDNEP1-209ENST00000574205 SPDYE16A6NNV3 312 aaPredicted RBP38.82■■■■□ 3.8
CTDNEP1-209ENST00000574205 PDHBP11177 359 aa38.81■■■■□ 3.8
CTDNEP1-209ENST00000574205 PSMA5P28066 241 aa38.81■■■■□ 3.8
CTDNEP1-209ENST00000574205 SP3Q02447 781 aa38.81■■■■□ 3.8
CTDNEP1-209ENST00000574205 ANKRD13CQ8N6S4 541 aa38.81■■■■□ 3.8
CTDNEP1-209ENST00000574205 FKTNO75072 461 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 DSG3P32926 999 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 FAM110CQ1W6H9 321 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 FBXO28Q9NVF7 368 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 FEM1BQ9UK73 627 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 CASP8AP2Q9UKL3 1982 aa38.8■■■■□ 3.8
CTDNEP1-209ENST00000574205 SNHG28P0DPA3 235 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 RASGRP2Q7LDG7 609 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 CHMP4CQ96CF2 233 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 PPP1R9AQ9ULJ8 1098 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 EXOSC10Q01780 885 aaKnown RBP38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 BLOC1S2Q6QNY1 142 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 LY9Q9HBG7 655 aa38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 ISY1Q9ULR0 285 aaKnown RBP38.79■■■■□ 3.8
CTDNEP1-209ENST00000574205 SH2B2O14492 632 aaPredicted RBP38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 STAT2P52630 851 aa38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 ANAPC15P60006 121 aa38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 CCDC96Q2M329 555 aa38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 TMTC2Q8N394 836 aa38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 SLF1Q9BQI6 1058 aa38.78■■■■□ 3.8
CTDNEP1-209ENST00000574205 A0A0G2JMZ2 1700 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 LIFRP42702 1097 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 KCTD1Q719H9 257 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 PRPF38AQ8NAV1 312 aaKnown RBP38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 SENP2Q9HC62 589 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 PRDM10Q9NQV6 1147 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 RBPJLQ9UBG7 517 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 MORF4L1Q9UBU8 362 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 RABGAP1Q9Y3P9 1069 aa38.77■■■■□ 3.8
CTDNEP1-209ENST00000574205 TMEM232C9JQI7 657 aa38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 CASTP20810 708 aaKnown RBP38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 POTEEQ6S8J3 1075 aa38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 ATG4CQ96DT6 458 aa38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 LRRC2Q9BYS8 371 aa38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 ADAMTS5Q9UNA0 930 aa38.76■■■■□ 3.8
CTDNEP1-209ENST00000574205 PLA2G6O60733 806 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 SAMD1Q6SPF0 538 aaPredicted RBP38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 FAM160B2Q86V87 743 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 MB21D1Q8N884 522 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 CHURC1Q8WUH1 139 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 TM6SF1Q9BZW5 370 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 TXNRD2Q9NNW7 524 aa38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 GPHNQ9NQX3 736 aaPredicted RBP38.75■■■■□ 3.79
CTDNEP1-209ENST00000574205 ZNF543Q08ER8 600 aa38.74■■■■□ 3.79
CTDNEP1-209ENST00000574205 TCEANC2Q96MN5 208 aa38.74■■■■□ 3.79
CTDNEP1-209ENST00000574205 PAGR1Q9BTK6 254 aa38.74■■■■□ 3.79
CTDNEP1-209ENST00000574205 GPATCH4Q5T3I0 446 aaKnown RBP38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 GPRC5AQ8NFJ5 357 aa38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 ERO1AQ96HE7 468 aa38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 CPA1P15085 419 aa38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 LACTBP83111 547 aaPredicted RBP38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 IKQ13123 557 aaPredicted RBP38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 ZSWIM6Q9HCJ5 1215 aa38.73■■■■□ 3.79
CTDNEP1-209ENST00000574205 FRMPD2Q68DX3 1309 aaPredicted RBP38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 RPS6KB1P23443 525 aa38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 ERVK-9P63128 1117 aa38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 ERVK-24P63145 666 aa38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 CATIPQ7Z7H3 387 aa38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 KIFC2Q96AC6 838 aa38.72■■■■□ 3.79
CTDNEP1-209ENST00000574205 VWA5AO00534 786 aa38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 KIF22Q14807 665 aa38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 ASPRV1Q53RT3 343 aa38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 NFXL1Q6ZNB6 911 aa38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 BTBD7Q9P203 1132 aa38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 COL11A1P12107 1806 aaPredicted RBP38.71■■■■□ 3.79
CTDNEP1-209ENST00000574205 CCDC69A6NI79 296 aa38.7■■■■□ 3.79
CTDNEP1-209ENST00000574205 CNMDO75829 334 aa38.7■■■■□ 3.79
CTDNEP1-209ENST00000574205 RUFY3Q7L099 469 aa38.7■■■■□ 3.79
CTDNEP1-209ENST00000574205 SGMS1Q86VZ5 419 aa38.7■■■■□ 3.79
CTDNEP1-209ENST00000574205 IL17RAQ96F46 866 aa38.7■■■■□ 3.79
CTDNEP1-209ENST00000574205 PEX10O60683 326 aa38.69■■■■□ 3.78
CTDNEP1-209ENST00000574205 TROAPQ12815 778 aa38.69■■■■□ 3.78
CTDNEP1-209ENST00000574205 BTNL9Q6UXG8 535 aa38.69■■■■□ 3.78
CTDNEP1-209ENST00000574205 CD99L2Q8TCZ2 262 aa38.69■■■■□ 3.78
CTDNEP1-209ENST00000574205 GPCPD1Q9NPB8 672 aa38.69■■■■□ 3.78
CTDNEP1-209ENST00000574205 PARP1P09874 1014 aaKnown RBP38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 FDX1P10109 184 aa38.68■■■■□ 3.78
CTDNEP1-209ENST00000574205 ZNF654Q8IZM8 581 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms