RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OLFML2BQ68BL8 750 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 KSR2Q6VAB6 950 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 DPP9Q86TI2 863 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 VPS37DQ86XT2 251 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
CHD3-213ENST00000571249 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 MAST3O60307 1309 aa8.76□□□□□ -1.01
CHD3-213ENST00000571249 USP17L5A8MUK1 530 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
CHD3-213ENST00000571249 KDM4AO75164 1064 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
CHD3-213ENST00000571249 TMPOP42166 694 aaKnown RBP8.75□□□□□ -1.01
CHD3-213ENST00000571249 CASP7P55210 303 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 BACE1P56817 501 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 UBE4AQ14139 1066 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 GCKRQ14397 625 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 KCNA10Q16322 511 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 PUS10Q3MIT2 529 aaKnown RBP8.75□□□□□ -1.01
CHD3-213ENST00000571249 LDHAL6AQ6ZMR3 332 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 DDX4Q9NQI0 724 aaKnown RBP8.75□□□□□ -1.01
CHD3-213ENST00000571249 CNNM1Q9NRU3 951 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 BTBD7Q9P203 1132 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 MTUS1Q9ULD2 1270 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 A0A1B0GUL6 1792 aa8.75□□□□□ -1.01
CHD3-213ENST00000571249 MYO7AQ13402 2215 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 RFX7Q2KHR2 1363 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 LCHNA4D1U4 455 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 MYADML2A6NDP7 307 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 ADAMTS4O75173 837 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 ADORA2AP29274 412 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 JAG1P78504 1218 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 ZXDAP98168 799 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 PUM1Q14671 1186 aaKnown RBP eCLIP8.74□□□□□ -1.01
CHD3-213ENST00000571249 SHROOM1Q2M3G4 852 aaPredicted RBP8.74□□□□□ -1.01
CHD3-213ENST00000571249 EP400NLQ6ZTU2 488 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 KIAA2013Q8IYS2 634 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 SCLYQ96I15 445 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 PUS3Q9BZE2 481 aaKnown RBP8.74□□□□□ -1.01
CHD3-213ENST00000571249 WNT8AQ9H1J5 351 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 SUGCTQ9HAC7 445 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
CHD3-213ENST00000571249 TMOD4Q9NZQ9 345 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 SUGT1Q9Y2Z0 365 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
CHD3-213ENST00000571249 COL4A4P53420 1690 aaPredicted RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 RBAK-RBAKDNI3L0D1 243 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 PDGFBP01127 241 aaPredicted RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 PDIA4P13667 645 aaKnown RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 CAP2P40123 477 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 CCNA1P78396 465 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 PICALMQ13492 652 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 CCSAPQ6IQ19 270 aaPredicted RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
CHD3-213ENST00000571249 NUP133Q8WUM0 1156 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 HIPK3Q9H422 1215 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 RABGAP1Q9Y3P9 1069 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 DOCK2Q92608 1830 aa8.73□□□□□ -1.01
CHD3-213ENST00000571249 ARVCFO00192 962 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 ENTPD3O75355 529 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 CD4P01730 458 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 FOXO4P98177 505 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 CLUL1Q15846 466 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 TMCO2Q7Z6W1 182 aaPredicted RBP8.72□□□□□ -1.01
CHD3-213ENST00000571249 RASEFQ8IZ41 740 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 KLHDC9Q8NEP7 349 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
CHD3-213ENST00000571249 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 OSBPL5Q9H0X9 879 aaPredicted RBP8.72□□□□□ -1.01
CHD3-213ENST00000571249 CEP295Q9C0D2 2601 aa8.72□□□□□ -1.01
CHD3-213ENST00000571249 ZZEF1O43149 2961 aa8.71□□□□□ -1.01
CHD3-213ENST00000571249 TBC1D12O60347 775 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 PRDX5P30044 214 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 CCDC57Q2TAC2 916 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 CAVIN4Q5BKX8 364 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 HERC6Q8IVU3 1022 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 WDR18Q9BV38 432 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 DLL3Q9NYJ7 618 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 MROH7Q68CQ1 1323 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 OTOGLQ3ZCN5 2332 aa8.71□□□□□ -1.02
CHD3-213ENST00000571249 SPEGQ15772 3267 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
CHD3-213ENST00000571249 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 RPUSD2Q8IZ73 545 aaKnown RBP8.7□□□□□ -1.02
CHD3-213ENST00000571249 GTF3C2Q8WUA4 911 aaPredicted RBP8.7□□□□□ -1.02
CHD3-213ENST00000571249 MAML3Q96JK9 1138 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 CHAMP1Q96JM3 812 aa8.7□□□□□ -1.02
CHD3-213ENST00000571249 GLT1D1Q96MS3 346 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms