RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 CHMLP26374 656 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 TDO2P48775 406 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 TRIM60Q495X7 471 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 BMP2KLQ5H9B9 411 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 DPP9Q86TI2 863 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 ZNF589Q86UQ0 364 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-205ENST00000571028 STK11IPQ8N1F8 1099 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 DCP1AQ9NPI6 582 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-205ENST00000571028 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
CCDC40-205ENST00000571028 MYH7P12883 1935 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 CYP2D7A0A087X1C5 515 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 GNAT2P19087 354 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 EVX2Q03828 476 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 VPS53Q5VIR6 699 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 ATP8A2Q9NTI2 1148 aa15.84■□□□□ 0.13
CCDC40-205ENST00000571028 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.13
CCDC40-205ENST00000571028 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 MINDY4BA8MYZ0 360 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 PATL2C9JE40 543 aaKnown RBP15.83■□□□□ 0.12
CCDC40-205ENST00000571028 USP17L12C9JPN9 530 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 USP17L21D6R901 530 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 HOXC6P09630 235 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 USP14P54578 494 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 JAG1P78504 1218 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 GRB14Q14449 540 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 SHROOM1Q2M3G4 852 aaPredicted RBP15.83■□□□□ 0.12
CCDC40-205ENST00000571028 TTC6Q86TZ1 520 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 AMOTL1Q8IY63 956 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 RUFY2Q8WXA3 655 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 NACAP1Q9BZK3 213 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 PDLIM7Q9NR12 457 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 CCDC171Q6TFL3 1326 aa15.83■□□□□ 0.12
CCDC40-205ENST00000571028 CNMDO75829 334 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 GH2P01242 217 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 CYBAP13498 195 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 PLCD1P51178 756 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 IFNL3Q8IZI9 196 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 NPLOC4Q8TAT6 608 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 NAPBQ9H115 298 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 IL25Q9H293 177 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 DNAJC18Q9H819 358 aa15.82■□□□□ 0.12
CCDC40-205ENST00000571028 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-205ENST00000571028 PRUNE2Q8WUY3 3088 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 SMIM22K7EJ46 135 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 MFAP1P55081 439 aaKnown RBP15.81■□□□□ 0.12
CCDC40-205ENST00000571028 LTBP2Q14767 1821 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 RAB3GAP1Q15042 981 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 TRPV1Q8NER1 839 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 DYNLL2Q96FJ2 89 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 C12orf42Q96LP6 360 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
CCDC40-205ENST00000571028 FRMPD3Q5JV73 1810 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 SEPT4O43236 478 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 CDC45O75419 566 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 RAG1P15918 1043 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 VCAM1P19320 739 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 SNX17Q15036 470 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 OLFML2BQ68BL8 750 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 POTEEQ6S8J3 1075 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 CATSPERGQ6ZRH7 1159 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 SH3RF1Q7Z6J0 888 aa15.8■□□□□ 0.12
CCDC40-205ENST00000571028 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
CCDC40-205ENST00000571028 TRIM43BA6NCK2 446 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 CLTBP09497 229 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
CCDC40-205ENST00000571028 DNAJB2P25686 324 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 ADORA2AP29274 412 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 GRIN2CQ14957 1233 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 CASC1Q6TDU7 716 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 SLC44A5Q8NCS7 719 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 PPM1EQ8WY54 764 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 TRIM43Q96BQ3 446 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-205ENST00000571028 FAM122AQ96E09 287 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-205ENST00000571028 BTBD7Q9P203 1132 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 ARPP21Q9UBL0 812 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-205ENST00000571028 SERPINB13Q9UIV8 391 aa15.79■□□□□ 0.12
CCDC40-205ENST00000571028 TTC28Q96AY4 2481 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 FOXP2O15409 715 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 STRNO43815 780 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 TLE2Q04725 743 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 FPGSQ05932 587 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 C12orf60Q5U649 245 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 GIMAP6Q6P9H5 292 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 LBX2Q6XYB7 198 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 USP38Q8NB14 1042 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 KIAA1683Q9H0B3 1180 aa15.78■□□□□ 0.12
CCDC40-205ENST00000571028 RPAP3Q9H6T3 665 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-205ENST00000571028 CABP5Q9NP86 173 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms