RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 H7C1W4 665 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 NDUFA10O95299 355 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
USP43-203ENST00000570827 ADD2P35612 726 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 NOP2P46087 812 aaKnown RBP11.15□□□□□ -0.62
USP43-203ENST00000570827 HEATR3Q7Z4Q2 680 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 NOC4LQ9BVI4 516 aaKnown RBP11.15□□□□□ -0.62
USP43-203ENST00000570827 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 TNKSO95271 1327 aa11.15□□□□□ -0.62
USP43-203ENST00000570827 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 ERCC5P28715 1186 aaPredicted RBP11.15□□□□□ -0.63
USP43-203ENST00000570827 MAGEA9P43362 315 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 NR1I3Q14994 352 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 RSRC2Q7L4I2 434 aaKnown RBP11.15□□□□□ -0.63
USP43-203ENST00000570827 C2CD5Q86YS7 1000 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 CAPS2Q9BXY5 557 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 ABHD10Q9NUJ1 306 aa11.15□□□□□ -0.63
USP43-203ENST00000570827 GOLGA6L7A0A1B0GV03 622 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 IGHMBP2P38935 993 aaKnown RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 CFAP58Q5T655 872 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 EHD4Q9H223 541 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 LY9Q9HBG7 655 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 MED4Q9NPJ6 270 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 FBXO2Q9UK22 296 aaPredicted RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 SMIM23A6NLE4 172 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 GYPCP04921 128 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 UQCRFS1P1P0C7P4 283 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 PDCLQ13371 301 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 KCTD19Q17RG1 926 aaPredicted RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
USP43-203ENST00000570827 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 PPANQ9NQ55 473 aaKnown RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 EXOC1Q9NV70 894 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 TTC26A0AVF1 554 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 EHBP1Q8NDI1 1231 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 SRPRBQ9Y5M8 271 aaKnown RBP11.14□□□□□ -0.63
USP43-203ENST00000570827 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
USP43-203ENST00000570827 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 PDE4DQ08499 809 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TMTC2Q8N394 836 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TRIML1Q8N9V2 468 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 HPSEQ9Y251 543 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 ESYT3A0FGR9 886 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 HGSO14964 777 aaPredicted RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 OPA1O60313 960 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 KRT18P05783 430 aaKnown RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 IFNAR1P17181 557 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 PRPF4BQ13523 1007 aaKnown RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 CT47A1Q5JQC4 288 aaPredicted RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 DYMQ7RTS9 669 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 TAF4BQ92750 862 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 PP2D1A8MPX8 630 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 VAV2P52735 878 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 LRRC31Q6UY01 552 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TICAM2Q86XR7 235 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 EFCC1Q9HA90 598 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 TCP11L1Q9NUJ3 509 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 SEPT11Q9NVA2 429 aaKnown RBP11.13□□□□□ -0.63
USP43-203ENST00000570827 LRWD1Q9UFC0 647 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 DUSP10Q9Y6W6 482 aa11.13□□□□□ -0.63
USP43-203ENST00000570827 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 MAGEB6P1A0A0J9YX57 407 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
USP43-203ENST00000570827 ERVK-24P63145 666 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 LETM2Q2VYF4 491 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 PACS2Q86VP3 889 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
USP43-203ENST00000570827 IFIH1Q9BYX4 1025 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms