RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
SMG6-206ENST00000570668 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
SMG6-206ENST00000570668 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
SMG6-206ENST00000570668 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 RAD21O60216 631 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 XRCC5P13010 732 aaKnown RBP13.18□□□□□ -0.3
SMG6-206ENST00000570668 ELNP15502 786 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 NT5C2P49902 561 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 UBXN2AP68543 259 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
SMG6-206ENST00000570668 MORN1Q5T089 497 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 TBC1D10CQ8IV04 446 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
SMG6-206ENST00000570668 USP6NLQ92738 828 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
SMG6-206ENST00000570668 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 TCP11L1Q9NUJ3 509 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
SMG6-206ENST00000570668 NMT2O60551 498 aa13.17□□□□□ -0.3
SMG6-206ENST00000570668 MTFR1Q15390 333 aa13.17□□□□□ -0.3
SMG6-206ENST00000570668 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
SMG6-206ENST00000570668 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
SMG6-206ENST00000570668 SHCBP1Q8NEM2 672 aa13.17□□□□□ -0.3
SMG6-206ENST00000570668 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
SMG6-206ENST00000570668 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
SMG6-206ENST00000570668 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
SMG6-206ENST00000570668 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 VWA5AO00534 786 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 SGSM2O43147 1006 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
SMG6-206ENST00000570668 INHAP05111 366 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 NEFLP07196 543 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 CYP2B6P20813 491 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 PTPREP23469 700 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
SMG6-206ENST00000570668 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
SMG6-206ENST00000570668 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
SMG6-206ENST00000570668 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
SMG6-206ENST00000570668 NEDD4P46934 1319 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 SLC15A5A6NIM6 579 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 STRNO43815 780 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 HMGCRP04035 888 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 BMP3P12645 472 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 CCL5P13501 91 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 ERCC3P19447 782 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 RGS2P41220 211 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 MAP2K5Q13163 448 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 GRB14Q14449 540 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
SMG6-206ENST00000570668 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 ESR2Q92731 530 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 TTC14Q96N46 770 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 MROH8Q9H579 483 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
SMG6-206ENST00000570668 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
SMG6-206ENST00000570668 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
SMG6-206ENST00000570668 COL11A1P12107 1806 aaPredicted RBP13.14□□□□□ -0.31
SMG6-206ENST00000570668 SLC25A27O95847 323 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 GJB1P08034 283 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 HOXC6P09630 235 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
SMG6-206ENST00000570668 EN2P19622 333 aaPredicted RBP13.14□□□□□ -0.31
SMG6-206ENST00000570668 MCCP23508 829 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 STAT3P40763 770 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 SLC1A4P43007 532 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 PTH1RQ03431 593 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 PLS1Q14651 629 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
SMG6-206ENST00000570668 TRIB2Q92519 343 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 APBA2Q99767 749 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 RNF208Q9H0X6 261 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 UNC93B1Q9H1C4 597 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
SMG6-206ENST00000570668 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 PLA2G6O60733 806 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 FDX1P10109 184 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 COPB2P35606 906 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 GJA8P48165 433 aa13.13□□□□□ -0.31
SMG6-206ENST00000570668 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms