RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 LRRC37A2A6NM11 1700 aa12.79□□□□□ -0.36
CTDNEP1-202ENST00000570380 FCER1AP12319 257 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 SHMT1P34896 483 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 SEPT2Q15019 361 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 KLHDC9Q8NEP7 349 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 SLC28A3Q9HAS3 691 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
CTDNEP1-202ENST00000570380 PGK2P07205 417 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 AKR1A1P14550 325 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 DSG3P32926 999 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 USP5P45974 858 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 CDK7P50613 346 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 MTX1Q13505 466 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 CCSAPQ6IQ19 270 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 TMEM199Q8N511 208 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 MB21D1Q8N884 522 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 ATG4CQ96DT6 458 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 SYNRGQ9UMZ2 1314 aa12.77□□□□□ -0.37
CTDNEP1-202ENST00000570380 MYADML2A6NDP7 307 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 CYP7A1P22680 504 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 PLCD1P51178 756 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 TMEM132BQ14DG7 1078 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 KCNA10Q16322 511 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 C11orf16Q9NQ32 467 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
CTDNEP1-202ENST00000570380 ERC2O15083 957 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 FLOT1O75955 427 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 ELP1O95163 1332 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 ZAP70P43403 619 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 MMP19Q99542 508 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 IL23AQ9NPF7 189 aa12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-202ENST00000570380 APBB1O00213 710 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 GPR37L1O60883 481 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 IGSF3O75054 1194 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 SLC25A27O95847 323 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 CYP2C18P33260 490 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 RABGGTBP53611 331 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 EVX2Q03828 476 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 GABPAQ06546 454 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
CTDNEP1-202ENST00000570380 ARVCFO00192 962 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 TLL1O43897 1013 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 FGBP02675 491 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 ASGR1P07306 291 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 MYOGP15173 224 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 SKIV2LQ15477 1246 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 CCDC158Q5M9N0 1113 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 SIAH1Q8IUQ4 282 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 ADAMTS5Q9UNA0 930 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
CTDNEP1-202ENST00000570380 PNMA6EA0A0J9YXQ4 647 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 RFXAPO00287 272 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 ADCY6O43306 1168 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 GNAI3P08754 354 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 KCTD2Q14681 263 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 VTI1AQ96AJ9 217 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 MTIF3Q9H2K0 278 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
CTDNEP1-202ENST00000570380 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms