RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
HERPUD1-219ENST00000570273 ITGBL1O95965 494 aaPredicted RBP17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 SSRP1Q08945 709 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 MTMR2Q13614 643 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 SPICE1Q8N0Z3 855 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 CCDC82Q8N4S0 544 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 C2orf69Q8N8R5 385 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 GMCL1Q96IK5 515 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 LZTS2Q9BRK4 669 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 KIAA1683Q9H0B3 1180 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 GPCPD1Q9NPB8 672 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 ORC3Q9UBD5 711 aaPredicted RBP17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 CNTNAP5Q8WYK1 1306 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
HERPUD1-219ENST00000570273 TRIM75PA6NK02 468 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 USP17L10C9JJH3 530 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 USP14P54578 494 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 SPP2Q13103 211 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 LDLRAD1Q5T700 205 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 KCTD1Q719H9 257 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 SRBD1Q8N5C6 995 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 NUP88Q99567 741 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 KIF3AQ9Y496 699 aa17.9■□□□□ 0.46
HERPUD1-219ENST00000570273 FMNL1O95466 1100 aaPredicted RBP17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 BMP3P12645 472 aa17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 AKAP17AQ02040 695 aaKnown RBP17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 ERO1BQ86YB8 467 aa17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 OTUD5Q96G74 571 aa17.89■□□□□ 0.46
HERPUD1-219ENST00000570273 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 SPDYE5A6NIY4 337 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 BACE1P56817 501 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 FUT2Q10981 343 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 FAM83BQ5T0W9 1011 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 NBPF11Q86T75 865 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 LPAR1Q92633 364 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 RNF26Q9BY78 433 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 CPVLQ9H3G5 476 aa17.89■□□□□ 0.45
HERPUD1-219ENST00000570273 CEP350Q5VT06 3117 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 UNCXA6NJT0 531 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 FOSBP53539 338 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 PPATQ06203 517 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 IKQ13123 557 aaPredicted RBP17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 TTBK2Q6IQ55 1244 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 SPZ1Q9BXG8 430 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 UBA5Q9GZZ9 404 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 AFG3L2Q9Y4W6 797 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 TRPM7Q96QT4 1865 aa17.88■□□□□ 0.45
HERPUD1-219ENST00000570273 hCG_1642624A0A1W2PR95 340 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 C19orf81C9J6K1 198 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 PRPF3O43395 683 aaKnown RBP17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 DDIT3P35638 169 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 HMGCS2P54868 508 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 PPIL2Q13356 520 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 DGKZQ13574 1117 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 SLC35G1Q2M3R5 365 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 SLC10A4Q96EP9 437 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 EMILIN3Q9NT22 766 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 PHIPQ8WWQ0 1821 aa17.87■□□□□ 0.45
HERPUD1-219ENST00000570273 TMEM232C9JQI7 657 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 DEXIO95424 95 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 PDCP20941 246 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 SLC16A2P36021 539 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 CST9Q5W186 159 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 WASF1Q92558 559 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 ALG1Q9BT22 464 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
HERPUD1-219ENST00000570273 CYTH3O43739 400 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 VCAM1P19320 739 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 SMARCA1P28370 1054 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 RRP36Q96EU6 259 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 C12orf42Q96LP6 360 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 VAT1LQ9HCJ6 419 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 CHMP5Q9NZZ3 219 aa17.85■□□□□ 0.45
HERPUD1-219ENST00000570273 CXCL11O14625 94 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 IRF6O14896 467 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 HSPA6P17066 643 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 STAT2P52630 851 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 HUNKP57058 714 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 AIFM3Q96NN9 605 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 RPAP3Q9H6T3 665 aaPredicted RBP17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 RIOX1Q9H6W3 641 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms