RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
HERPUD1-217ENST00000569429 MROH5Q6ZUA9 1318 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 KIF16BQ96L93 1317 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 H0Y858 1186 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 COBLO75128 1261 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 ASNSP08243 561 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 PRDX5P30044 214 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 DSG3P32926 999 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 KCNA10Q16322 511 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 LMBR1LQ6UX01 489 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 RNF135Q8IUD6 432 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 ADSSL1Q8N142 457 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 RTN4Q9NQC3 1192 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 TLR9Q9NR96 1032 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 BTBD7Q9P203 1132 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 SIPA1L1O43166 1804 aa8.36□□□□□ -1.07
HERPUD1-217ENST00000569429 A0A0U1RQG5 324 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 KIF28PB7ZC32 967 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L15C9J2P7 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L13C9JLJ4 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L11C9JVI0 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L18D6R9N7 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L22D6RA61 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L17D6RBQ6 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L19D6RCP7 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L20D6RJB6 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 PFKMP08237 780 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 AKR1A1P14550 325 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 CST5P28325 142 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 AVPR2P30518 371 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 ZEB1P37275 1124 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 VCPP55072 806 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L24Q0WX57 530 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 PUM1Q14671 1186 aaKnown RBP eCLIP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 CCDC30Q5VVM6 783 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 GDPD5Q8WTR4 605 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 NKD2Q969F2 451 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 HIPK3Q9H422 1215 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
HERPUD1-217ENST00000569429 UMODL1Q5DID0 1318 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 SYNRGQ9UMZ2 1314 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 CNOT1A5YKK6 2376 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 H3BQ06 376 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 LDHBP07195 334 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 CCL23P55773 120 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 PICALMQ13492 652 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 USP17L2Q6R6M4 530 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 CATSPERGQ6ZRH7 1159 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 SPRED2Q7Z698 418 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 ABRAQ8N0Z2 381 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 LINS1Q8NG48 757 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 C12orf42Q96LP6 360 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 PUS3Q9BZE2 481 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 WNT8AQ9H1J5 351 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 TRIM35Q9UPQ4 493 aa8.34□□□□□ -1.07
HERPUD1-217ENST00000569429 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 SALL1Q9NSC2 1324 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 ELL2O00472 640 aaPredicted RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 PDE8BO95263 885 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 COL19A1Q14993 1142 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 MCTP2Q6DN12 878 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 HERC6Q8IVU3 1022 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 VGLL2Q8N8G2 317 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 PCSK9Q8NBP7 692 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 ATG2AQ2TAZ0 1938 aa8.33□□□□□ -1.08
HERPUD1-217ENST00000569429 ASGR1P07306 291 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 ZXDAP98168 799 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 SIGLEC14Q08ET2 396 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 SLC43A3Q8NBI5 491 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 PABPC5Q96DU9 382 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 MOV10L1Q9BXT6 1211 aaKnown RBP8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 IGSF5Q9NSI5 407 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 DLL3Q9NYJ7 618 aa8.32□□□□□ -1.08
HERPUD1-217ENST00000569429 ASH1LQ9NR48 2969 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 A0A1B0GUL7 405 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 MYADML2A6NDP7 307 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 SPDYE16A6NNV3 312 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 DUSP11O75319 330 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 IFIT1P09914 478 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms