RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	LMNB1	P20700	586 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	SDHB	P21912	280 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	DUSP4	Q13115	394 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	EAPP	Q56P03	285 aa	Predicted RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	DIEXF	Q68CQ4	756 aa	Known RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	NLRX1	Q86UT6	975 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	CCDC84	Q86UT8	332 aa	Predicted RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	FERMT3	Q86UX7	667 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	MRPL41	Q8IXM3	137 aa	Known RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	NOC4L	Q9BVI4	516 aa	Known RBP	6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	MRI	Q9BWK5	157 aa		6.42	□□□□□ -1.38
UBR1-209	ENST00000569243	NOTO	A8MTQ0	251 aa		6.41	□□□□□ -1.38
UBR1-209	ENST00000569243	ST13	P50502	369 aa	Known RBP	6.41	□□□□□ -1.38
UBR1-209	ENST00000569243	SND1	Q7KZF4	910 aa	Known RBP eCLIP	6.41	□□□□□ -1.38
UBR1-209	ENST00000569243	GPR62	Q9BZJ7	368 aa		6.41	□□□□□ -1.38
UBR1-209	ENST00000569243	ETV3	P41162	512 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	LIG3	P49916	1009 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	TSNAXIP1	Q2TAA8	658 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	SLC6A19	Q695T7	634 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	DUSP9	Q99956	384 aa	Known RBP	6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	DPH2	Q9BQC3	489 aa	Predicted RBP	6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	MIR1-1HG	Q9H1L0	117 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	ADAM30	Q9UKF2	790 aa		6.4	□□□□□ -1.38
UBR1-209	ENST00000569243	ANKRD33B	A6NCL7	494 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	GRK4	P32298	578 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	SLURP1	P55000	103 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	PDE4B	Q07343	736 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	IGDCC3	Q8IVU1	814 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	SMPD4	Q9NXE4	827 aa		6.39	□□□□□ -1.39
UBR1-209	ENST00000569243	FFAR3	O14843	346 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	SLPI	P03973	132 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	ITGAE	P38570	1179 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	YBX1	P67809	324 aa	Known RBP	6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	DAB2	P98082	770 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	RPL6	Q02878	288 aa	Known RBP	6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	TAF1C	Q15572	869 aa	Predicted RBP	6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	MCAT	Q8IVS2	390 aa	Known RBP	6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	LINC01599	Q8WXQ3	324 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	SLITRK6	Q9H5Y7	841 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	USP31	Q70CQ4	1352 aa		6.38	□□□□□ -1.39
UBR1-209	ENST00000569243	CDK8	P49336	464 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	TEK	Q02763	1124 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	CRB2	Q5IJ48	1285 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	LDHD	Q86WU2	507 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	DTWD2	Q8NBA8	298 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	TMEM87B	Q96K49	555 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	USP40	Q9NVE5	1235 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	TJP2	Q9UDY2	1190 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	PCDHB5	Q9Y5E4	795 aa		6.37	□□□□□ -1.39
UBR1-209	ENST00000569243	USP2	O75604	605 aa	Predicted RBP	6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	PGR	P06401	933 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	C6	P13671	934 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	TFE3	P19532	575 aa	Predicted RBP	6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	GDF5	P43026	501 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	SEPT6	Q14141	434 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	OLFML2B	Q68BL8	750 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	TMC4	Q7Z404	712 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	ZFPM1	Q8IX07	1006 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	PARP2	Q9UGN5	583 aa		6.36	□□□□□ -1.39
UBR1-209	ENST00000569243	ERCC3	P19447	782 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	NT5DC1	Q5TFE4	455 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	PHC3	Q8NDX5	983 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	DNAJB8	Q8NHS0	232 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	G6PC3	Q9BUM1	346 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	CRTAC1	Q9NQ79	661 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	KCNH3	Q9ULD8	1083 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	CEP131	Q9UPN4	1083 aa		6.35	□□□□□ -1.39
UBR1-209	ENST00000569243	BUB1B	O60566	1050 aa	Predicted RBP	6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	NCKAP1L	P55160	1127 aa		6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	PSMD2	Q13200	908 aa		6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	SLC14A2	Q15849	920 aa		6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	TMEM201	Q5SNT2	666 aa		6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.34	□□□□□ -1.39
UBR1-209	ENST00000569243	PRR36	Q9H6K5	1346 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	ABLIM1	O14639	778 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	LMNB2	Q03252	620 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	MEI1	Q5TIA1	1274 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	CPZ	Q66K79	652 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	TMC6	Q7Z403	805 aa		6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	ACSF2	Q96CM8	615 aa	Predicted RBP	6.33	□□□□□ -1.4
UBR1-209	ENST00000569243	C1QTNF3-AMACR	E9PGA6	284 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	NRDC	O43847	1150 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	LRRN2	O75325	713 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	YARS	P54577	528 aa	Known RBP	6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	XPC	Q01831	940 aa	Predicted RBP	6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	PWP1	Q13610	501 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	SLFN12	Q8IYM2	578 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	ADGRG2	Q8IZP9	1017 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	CYB5D2	Q8WUJ1	264 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	RSRP1	Q9BUV0	290 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	PCDHA5	Q9Y5H7	936 aa		6.32	□□□□□ -1.4
UBR1-209	ENST00000569243	FAM221A	A4D161	298 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	ITGB3	P05106	788 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	CTSH	P09668	335 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	PNLIP	P16233	465 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	TACR2	P21452	398 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	MAP3K11	Q16584	847 aa		6.31	□□□□□ -1.4
UBR1-209	ENST00000569243	CEP128	Q6ZU80	1094 aa		6.31	□□□□□ -1.4

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