RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.166e-7■□□□□ 10.9
CNOT1-216ENST00000569240 KRR1Q13601 381 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 TMEM132AQ24JP5 1023 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 CENPUQ71F23 418 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 DSCC1Q9BVC3 393 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 KIF9Q9HAQ2 790 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SEPT3Q9UH03 358 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ASIC3Q9UHC3 531 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 BTBD11A6QL63 1104 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 EIF3HO15372 352 aaKnown RBP eCLIP7.81□□□□□ -1.167e-7■■■■□ 19.6
CNOT1-216ENST00000569240 PER1O15534 1290 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 PFKFB2O60825 505 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ZKSCAN3Q9BRR0 538 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 IMPG2Q9BZV3 1241 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 STAP2Q9UGK3 403 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 MCF2LO15068 1137 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 SPOPO43791 374 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 KLHL30Q0D2K2 578 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 SYCP2LQ5T4T6 812 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 MICU3Q86XE3 530 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 EPN3Q9H201 632 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 KAT14Q9H8E8 782 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 SSX2IPQ9Y2D8 614 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 PGRMC1O00264 195 aaKnown RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 MARCKSP29966 332 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 LCA5Q86VQ0 697 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 DZIP3Q86Y13 1208 aaKnown RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 ABTB1Q969K4 478 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 LZTS2Q9BRK4 669 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 YIPF3Q9GZM5 350 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 C19orf44Q9H6X5 657 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 SENP1Q9P0U3 644 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 GTPBP6O43824 516 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 TTC4O95801 387 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 HSPA1LP34931 641 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 TMTC3Q6ZXV5 915 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 FAM186BQ8IYM0 893 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 E9PMD0 336 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 KRIT1O00522 736 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 PPP1R37O75864 691 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 KCNA4P22459 653 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 ATP1A2P50993 1020 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 RAPGEF1Q13905 1077 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 GALNT17Q6IS24 598 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 KIRREL3Q8IZU9 778 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 LINS1Q8NG48 757 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 BCRP11274 1271 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 METTL24Q5JXM2 366 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 ZNF444Q8N0Y2 327 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC28BQ9BUN5 200 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 L2HGDHQ9H9P8 463 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 PODXLO00592 558 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 ANXA13P27216 316 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 TRAPPC10P48553 1259 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 CTAGE3PQ8IX95 158 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 TRIM55Q9BYV6 548 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 FAM192AQ9GZU8 254 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 ETAA1Q9NY74 926 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 MRFAP1Q9Y605 127 aa7.8□□□□□ -1.16
CNOT1-216ENST00000569240 USP40Q9NVE5 1235 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TMEM51Q9NW97 253 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 DISP3Q9P2K9 1392 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SHANK2Q9UPX8 1470 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SLC27A2O14975 620 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 STK10O94804 968 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 KRT4P19013 534 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 AP2B1P63010 937 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 IFIT5Q13325 482 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CAVIN4Q5BKX8 364 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 MAP7D3Q8IWC1 876 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SRRM1Q8IYB3 904 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SYCP3Q8IZU3 236 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 PPP1R14BQ96C90 147 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 EDEM3Q9BZQ6 932 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TTI1O43156 1089 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 DEAF1O75398 565 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 KRT3P12035 628 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SERPINB10P48595 397 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 HSPA13P48723 471 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 BLVRAP53004 296 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 ZBED6P86452 979 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC105Q8IYK2 499 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SLC35F6Q8N357 371 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 DDI1Q8WTU0 396 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TRIM15Q9C019 465 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 SLC24A3Q9HC58 644 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 UTP6Q9NYH9 597 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 ABCC4O15439 1325 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 HEXIM1O94992 359 aaKnown RBP7.79□□□□□ -1.16
CNOT1-216ENST00000569240 MYO1EQ12965 1108 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 AGBL2Q5U5Z8 902 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 DAB2IPQ5VWQ8 1189 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 TRIM11Q96F44 468 aa7.79□□□□□ -1.16
CNOT1-216ENST00000569240 CHMP6Q96FZ7 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms