RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MGAMO43451 1857 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 A0A0G2JLL6 359 aaPredicted RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 PLIN1O60240 522 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 PLA2G5P39877 138 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 PTGIRP43119 386 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 GYG1P46976 350 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 GRIK5Q16478 980 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 APOBEC3HQ6NTF7 200 aaKnown RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 PRRT2Q7Z6L0 340 aaPredicted RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 C8orf58Q8NAV2 365 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 KDF1Q8NAX2 398 aaPredicted RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 TBC1D22AQ8WUA7 517 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 FAM84BQ96KN1 310 aaPredicted RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
CDH13-212ENST00000569144 OSBPL3Q9H4L5 887 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 MYH16Q9H6N6 1097 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 PFASO15067 1338 aa7.45□□□□□ -1.22
CDH13-212ENST00000569144 DDX60LQ5H9U9 1706 aaKnown RBP7.44□□□□□ -1.22
CDH13-212ENST00000569144 EYSQ5T1H1 3165 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 SPINT1O43278 529 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 COL6A1P12109 1028 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 FOXO4P98177 505 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 CALD1Q05682 793 aaKnown RBP7.44□□□□□ -1.22
CDH13-212ENST00000569144 USP4Q13107 963 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 FAM110CQ1W6H9 321 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 TBC1D9Q6ZT07 1266 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 CYP2U1Q7Z449 544 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 SMCR8Q8TEV9 937 aaPredicted RBP7.44□□□□□ -1.22
CDH13-212ENST00000569144 FAM151AQ8WW52 585 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 STK31Q9BXU1 1019 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 CHMP3Q9Y3E7 222 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 MAST3O60307 1309 aa7.44□□□□□ -1.22
CDH13-212ENST00000569144 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 CHAF1AQ13111 956 aaPredicted RBP7.43□□□□□ -1.22
CDH13-212ENST00000569144 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 TAF7LQ5H9L4 462 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 HHIPL2Q6UWX4 724 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 GADL1Q6ZQY3 521 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 SCYL3Q8IZE3 742 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 ANKRD13CQ8N6S4 541 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 LINS1Q8NG48 757 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 FAM122AQ96E09 287 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 INSM2Q96T92 566 aaPredicted RBP7.43□□□□□ -1.22
CDH13-212ENST00000569144 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 CNNM1Q9NRU3 951 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 SUGT1Q9Y2Z0 365 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 ZHX2Q9Y6X8 837 aa7.43□□□□□ -1.22
CDH13-212ENST00000569144 TTLL8A6PVC2 850 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 SOBPA7XYQ1 873 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 PTPRAP18433 802 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 RALBP1Q15311 655 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 LRRC26Q2I0M4 334 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 EML3Q32P44 896 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 MAP3K21Q5TCX8 1036 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 LMBR1LQ6UX01 489 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 G2E3Q7L622 706 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 FBXO33Q7Z6M2 555 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 DEPDC4Q8N2C3 294 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 TSPYL6Q8N831 410 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 DNAAF4Q8WXU2 420 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 MYLIPQ8WY64 445 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 ZNF594Q96JF6 807 aaPredicted RBP7.42□□□□□ -1.22
CDH13-212ENST00000569144 LBHD1Q9BQE6 289 aaPredicted RBP7.42□□□□□ -1.22
CDH13-212ENST00000569144 POLMQ9NP87 494 aaPredicted RBP7.42□□□□□ -1.22
CDH13-212ENST00000569144 PICK1Q9NRD5 415 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 AGTPBP1Q9UPW5 1226 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 AFG3L2Q9Y4W6 797 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 MUC3AQ02505 3323 aa7.42□□□□□ -1.22
CDH13-212ENST00000569144 A0A1W2PRU2 124 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 PHF20L1A8MW92 1017 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 MEN1O00255 615 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 ATP9BO43861 1147 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 FRAT2O75474 233 aaPredicted RBP7.41□□□□□ -1.22
CDH13-212ENST00000569144 FOSL2P15408 326 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 CTSOP43234 321 aaPredicted RBP7.41□□□□□ -1.22
CDH13-212ENST00000569144 TCP10Q12799 353 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 NCOA4Q13772 614 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDH13-212ENST00000569144 TRIB2Q92519 343 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 ARHGEF10LQ9HCE6 1279 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 RAB6BQ9NRW1 208 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
CDH13-212ENST00000569144 ATRNL1Q5VV63 1379 aa7.41□□□□□ -1.22
CDH13-212ENST00000569144 PRUNE2Q8WUY3 3088 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 FIGNL2A6NMB9 653 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 MAN1A2O60476 641 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
CDH13-212ENST00000569144 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.22
CDH13-212ENST00000569144 NFIAQ12857 509 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 CAVIN4Q5BKX8 364 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 EPHA10Q5JZY3 1008 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 USP17L2Q6R6M4 530 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 TTYH1Q9H313 450 aaPredicted RBP7.4□□□□□ -1.22
CDH13-212ENST00000569144 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
CDH13-212ENST00000569144 ADAMTS8Q9UP79 889 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 DAGLAQ9Y4D2 1042 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms