RNA–Protein interactions for RNA: ENST00000568899.5

LAT-215, Transcript of linker for activation of T cells, human

TSL 2

Gene LAT, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAT-215	ENST00000568899	RBPJL	Q9UBG7	517 aa		11.15	□□□□□ -0.62
LAT-215	ENST00000568899	SMC3	Q9UQE7	1217 aa		11.15	□□□□□ -0.62
LAT-215	ENST00000568899	MYH7	P12883	1935 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L12	C9JPN9	530 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L21	D6R901	530 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	MYC	P01106	439 aa	Predicted RBP	11.14	□□□□□ -0.63
LAT-215	ENST00000568899	SYT1	P21579	422 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	IRX3	P78415	501 aa	Predicted RBP	11.14	□□□□□ -0.63
LAT-215	ENST00000568899	CREB3L3	Q68CJ9	461 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	ZSCAN25	Q6NSZ9	544 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	CWC27	Q6UX04	472 aa	Known RBP	11.14	□□□□□ -0.63
LAT-215	ENST00000568899	SLAIN1	Q8ND83	568 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	SHISA4	Q96DD7	197 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	TSPY26P	Q9H489	355 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	PDRG1	Q9NUG6	133 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	CCDC39	Q9UFE4	941 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	SWAP70	Q9UH65	585 aa		11.14	□□□□□ -0.63
LAT-215	ENST00000568899	GSG1L2	A8MUP6	293 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	RNF113A	O15541	343 aa	Known RBP	11.13	□□□□□ -0.63
LAT-215	ENST00000568899	ADCY3	O60266	1144 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	CNMD	O75829	334 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	TPM2	P07951	284 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	ELN	P15502	786 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	VCAM1	P19320	739 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	CAST	P20810	708 aa	Known RBP	11.13	□□□□□ -0.63
LAT-215	ENST00000568899	USP14	P54578	494 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899		Q3C1V9	767 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	CTR9	Q6PD62	1173 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.13	□□□□□ -0.63
LAT-215	ENST00000568899	CATSPERG	Q6ZRH7	1159 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	C16orf86	Q6ZW13	317 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	UBE2Q1	Q7Z7E8	422 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	FBXL16	Q8N461	479 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	GPRC5A	Q8NFJ5	357 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	APPBP2	Q92624	585 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	CABP5	Q9NP86	173 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	RBM8A	Q9Y5S9	174 aa	Known RBP	11.13	□□□□□ -0.63
LAT-215	ENST00000568899	SLC4A4	Q9Y6R1	1079 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	DOCK3	Q8IZD9	2030 aa		11.13	□□□□□ -0.63
LAT-215	ENST00000568899	NAV1	Q8NEY1	1877 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L15	C9J2P7	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L13	C9JLJ4	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L11	C9JVI0	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L18	D6R9N7	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L22	D6RA61	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L17	D6RBQ6	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L19	D6RCP7	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L20	D6RJB6	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	SLC27A2	O14975	620 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	OFD1	O75665	1012 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	GJB1	P08034	283 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	ZFY	P08048	801 aa	Predicted RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	HMGB1	P09429	215 aa	Known RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	CCL5	P13501	91 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	AKR1B1	P15121	316 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	MSN	P26038	577 aa	Known RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	CDK8	P49336	464 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	PTH1R	Q03431	593 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP17L24	Q0WX57	530 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	ZYX	Q15942	572 aa	Known RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	SBK1	Q52WX2	424 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	KIAA1755	Q5JYT7	1200 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	PRPF38B	Q5VTL8	546 aa	Known RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	GIMAP6	Q6P9H5	292 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	LBX2	Q6XYB7	198 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	TMEM179	Q6ZVK1	233 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	USP6NL	Q92738	828 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	COA7	Q96BR5	231 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	FEZ1	Q99689	392 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	PORCN	Q9H237	461 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	ZKSCAN5	Q9Y2L8	839 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899		U3KPZ7	1027 aa	Predicted RBP	11.12	□□□□□ -0.63
LAT-215	ENST00000568899	MGAM	O43451	1857 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899	CEP290	O15078	2479 aa		11.12	□□□□□ -0.63
LAT-215	ENST00000568899		M0R2C6	588 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	GPAA1	O43292	621 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	INHA	P05111	366 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	RPS6KB1	P23443	525 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	GJA8	P48165	433 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	ERVK-9	P63128	1117 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	ERVK-24	P63145	666 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	NMI	Q13287	307 aa	Predicted RBP	11.11	□□□□□ -0.63
LAT-215	ENST00000568899	BLOC1S2	Q6QNY1	142 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	CLEC10A	Q8IUN9	316 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.11	□□□□□ -0.63
LAT-215	ENST00000568899	CCDC17	Q96LX7	622 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	JAKMIP1	Q96N16	626 aa	Known RBP	11.11	□□□□□ -0.63
LAT-215	ENST00000568899	LLPH	Q9BRT6	129 aa	Known RBP	11.11	□□□□□ -0.63
LAT-215	ENST00000568899	UNC93B1	Q9H1C4	597 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	PAK6	Q9NQU5	681 aa	Predicted RBP	11.11	□□□□□ -0.63
LAT-215	ENST00000568899	MTMR6	Q9Y217	621 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	TMX2	Q9Y320	296 aa		11.11	□□□□□ -0.63
LAT-215	ENST00000568899	SYCE3	A1L190	88 aa		11.1	□□□□□ -0.63
LAT-215	ENST00000568899	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.1	□□□□□ -0.63
LAT-215	ENST00000568899	MPHOSPH10	O00566	681 aa	Known RBP	11.1	□□□□□ -0.63
LAT-215	ENST00000568899	UBXN2A	P68543	259 aa		11.1	□□□□□ -0.63
LAT-215	ENST00000568899	ATL3	Q6DD88	541 aa		11.1	□□□□□ -0.63
LAT-215	ENST00000568899	SEC62	Q99442	399 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms